KEGG   Pyrobaculum neutrophilum: Tneu_1381
Entry
Tneu_1381         CDS       T00682                                 
Name
(GenBank) exosome complex exonuclease 1
  KO
K11600  exosome complex component RRP41
Organism
tne  Pyrobaculum neutrophilum
Pathway
tne03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tne00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Tneu_1381
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tne03019]
    Tneu_1381
Messenger RNA biogenesis [BR:tne03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     Tneu_1381
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     Tneu_1381
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PKMT_2nd
Other DBs
NCBI-ProteinID: ACB40307
UniProt: B1Y978
Position
complement(1228818..1229558)
AA seq 246 aa
MKKPPVPLLQGGVRADGRAPDQMREVQISVGVISNADGSAMVSYGATTAVAAVYGPREMH
PRHLSLPDRGVMRVRYHMAPFSTKDERKSPTPSRREIEISKVLREALEPAVMLEQYPRSR
IDVFIEILQADGSTRVASLTAASLALADAGIYMRDLVIGVSVGLVDGTVVLDLNGLEDQY
GEGDLPVGYMPNLRRYTLLQLDGAWGRDKLLEALNLAVKGAEFVYQKARDALKNRYMAIA
EEIYGR
NT seq 741 nt   +upstreamnt  +downstreamnt
atgaagaaacctcctgtgccgttgctccaggggggcgtaagagcagacggcagagccccc
gaccagatgagggaggttcagatctccgttggggtcatcagcaatgctgacggatccgcg
atggtttcctacggcgctacaaccgccgtggccgccgtatatgggcctagggagatgcac
ccgcggcacctctcgttaccagatagaggggtcatgcgggtgaggtaccacatggcgccg
tttagcacaaaagacgagcgcaagagcccgacgccctctaggcgggagatcgagataagt
aaggtcctgagggaggctttagagccggcggtcatgctggagcagtaccccaggtctagg
atagacgtgttcatcgaaatccttcaggcagacggctccacccgtgtggcatcgctaacc
gccgcgtctttagccctcgccgatgctgggatatacatgagggacctcgtcataggcgtg
tcggtggggttggttgacggcacagttgtgctcgatttaaacggccttgaggaccaatac
ggcgagggggacctccccgtgggctatatgccgaatctgaggaggtacacccttctgcag
ctagacggagcatggggcagggacaagcttctggaggccctcaacctcgccgttaaaggc
gccgagttcgtatatcagaaggcccgcgacgctttgaagaacagatacatggcgatagca
gaggagatctacgggaggtga

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