KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00013647G001
Entry
GSTEN00013647G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:tng00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tng03021]
    GSTEN00013647G001
   03036 Chromosome and associated proteins [BR:tng03036]
    GSTEN00013647G001
Transcription machinery [BR:tng03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     GSTEN00013647G001
Chromosome and associated proteins [BR:tng03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     GSTEN00013647G001
    SLIK complex
     GSTEN00013647G001
SSDB
Motif
Pfam: SNF2-rel_dom CHD1-like_C Helicase_C Chromo HDA2-3 CDH1_2_SANT_HL1 CHDCT2
Other DBs
NCBI-ProteinID: CAF96563
UniProt: Q4SS19
Position
undetermined
AA seq 1919 aa
MAGCSEDESLNNSSGESSNSEDESGSGSASGSASSSSSSSSSSSSQSGSSDSGSGSDSGS
QSDSDAEKSKEKMEPSNKSNIDGAEFWKSNPSILAVQRSAMLRKQHLQQQQQQRQTSKSG
SDEDSSSSDESDSSSSSRRRRNSSDSGSGSDSDSSSGSDSSAEDNSNETTSDYEPGHKIK
SRKPPTKAAARRRKPRSSSSEDECESKAVSAGPRRQATVNISYKEDEELKTDSDDLVEVL
GEDVPQLEEDEFETVERVMDSRIGRKRATGSATTVYAVEADGDPNADFSPSREPGDVQYL
IKWPLQKDIEYFNCQEELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSECS
WEDGALIAKKFQKRIDDYMSRHQSKTIPSRDCKVLKQRPRFVPMKKQPAFIDEGLELRDY
QLDGLNWMAHSWCKGNSCILADEMGLGKTIQTICFLNYLFSEHQLYGPFLLVVPLSTLTS
WQREIQLWAPQMNVVVYLGDISSRTMVGLCFCLLLAPSLPACLPVCVCVCVCVCVREREK
TGLLTSFLPVYQIRTHEWIHVHSKRMKFNILLTTYEILLKDKVGLFVAPSSLSGGRPGLP
VLSFLGGVNWAFIGVDEAHRLKNDDSLLYKTMMEFKSNHRLLITGTPLQNSLKELWSLLH
FIMPDKFHSWELFEEEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEM
SAIQKQYYKWILTRNYKALSKGVKGSTSGFLNIMMELKKCCNHCYLVRPPEEDLNKSEAL
QQLVRSSGKLVLLDKLLIRLKERGHRVLIFSQMVRMLDILADYLRSRQFLFQRLDGSIKG
EMRKQALDHFNAEGSEVRGHAGSAWPGSRSSLTAPAPLPLCLQDFCFLLSTRAGGLGINL
ASADTVVIFDSDWNPQNDLQAQARAHRIGQKRQVNIYRLVTKGSVEEDIIERAKKKMVLD
HLVIQRMDTTGKTVLHTGAAPSSSAPFNKEELSAILKFGAEELFKEPEGEEQEPQVGAGP
DGGGPLAQARSGPEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFSMMEDEEMDSE
RSQRSWDDIIPEEQRRRLEEEERQKELEEIYLLPRMRNCAKQISFNAGPGRQSRSRRYSG
SEQRLPVGPQAAQEAGASSHHPAGEHQRLQRRRDPEVCEELQEVWGTAGEVRLRRGSPGV
RQGASANPAAPPGWTPSLGTRSCVEKSEHDLKRLAETVHNGCVRTLRENPCGPEKASGGT
PPGPVRTAERVRGWQETQAHAAVCSPGGKRGKVKGPTFRISGVQVNAKLVISHEQELAPL
HKAIPADPEDRKRYVIPCHSKAAHFDIDWGKEDDSSLLVGIYEYGYGSWEMIKMDPDLNL
THKLLPDDPDKKPQAKQLQTRADYLIKLLSKHLARKEAHKQAGTANSRKRKPRSKTSKTV
KPAKTDDVMKSTSSEPSSDKRSDEDEEEEEDEEAEEKEKEKATAAAKTLSRRAREAAAAK
EEDEDEGQPKQEERSPSGERELKRRETRKEGKKDKGDGWEGKEAKDAKERKEAKPAEAAQ
RHEDGPDKVEAKGEGRERARKASDVPVHITASGEPVPVSEEPEELDQKTFSEVGVRLARP
GPAPPSAGLTPALPLQCKEKMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITG
CLQKYSNPDEIKLWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESAQALEQNTRIINT
YNYKHPDSDRLKDSIQQDESSRDSCGSDRHPPSARHYEGGKERHASEALRRGAAAERKRP
HPAFSNGKDHRDRDHYRPDSRDRDRFYGDGKHRKLDELSSSRDHRLDSKDHPHSEHRSTY
RYHSDWQSEARAGGGSGGGPRSPLDQRSPYDSRSPLGHRSPFDSDHRSTPEQMWSGRKT
NT seq 5757 nt   +upstreamnt  +downstreamnt
atggctggatgcagcgaggacgagagcctgaacaacagcagtggagaatccagtaactct
gaggatgaatctggctccggatcggcctccggctccgcttccagctcctcttccagctcg
tccagcagcagcagccagtcaggaagcagcgactcaggtagcggttccgactctggcagc
cagtcggactctgacgccgaaaagtccaaggagaagatggaaccatccaacaagtcgaac
atcgacggagcggagttttggaagtccaacccgagcatcctggccgtgcagaggtccgcc
atgctcaggaaacagcacctccagcagcagcagcagcagaggcaaacgtccaaaagtggc
tctgatgaggactcgtccagcagcgacgaatcggactcttccagtagctccagaaggagg
agaaactcctccgactccggctccggctccgactcggacagcagctccgggtctgactcc
tcggccgaagacaacagcaacgaaaccacctccgactacgaacccggacacaaaatcaag
agcaggaagcctccgaccaaagcagcggccagaagaagaaagccccgaagctcctcctcc
gaggacgagtgcgaaagcaaggcggtgtcggcaggcccgcggcggcaggccaccgtcaac
atcagctacaaggaggacgaggagctgaagacggactcggacgacctggtggaggtcctg
ggggaggacgtgccgcagctggaggaggacgagtttgaaacggtggagagagtcatggac
agcaggatagggaggaaaagagccacaggcagcgccaccaccgtgtacgccgtggaggcc
gacggagatcccaacgccgacttcagccccagcagggagcccggggacgtccagtacctg
atcaaatggcctctccagaaggacatcgagtacttcaactgtcaggaggagctgatggat
gacctgcactcgcagtaccagctggtggagcgcatcatcgggcactccaaccagaagtcg
gcggcgggctaccccgactacctgtgcaagtggcaggggctgccgtactcggagtgcagc
tgggaggacggagctctgatcgccaagaagttccagaagcgcatcgacgactacatgagc
agacaccagtccaagaccatcccctccagagactgcaaggttctgaagcagaggcccagg
tttgtgcccatgaagaagcagccagcgttcatcgacgagggcctggagctgcgggactac
cagctggacggcttgaactggatggcccactcctggtgcaaaggcaacagttgcatcctg
gccgatgagatgggcctggggaagaccatccagaccatctgcttcctcaactacctgttc
agcgagcaccagctctacgggccctttctgctggtggttcctctctccacgctgacctcc
tggcagagagagatccagctgtgggcccctcagatgaacgtggtggtttacctcggagac
atcagcagcaggaccatggtgggtttgtgcttctgcctcctgttggcaccatcactgcct
gcctgcctgcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagagaaa
acaggcctgctgacctcctttctgcctgtttaccagatccggacccatgagtggattcat
gttcacagcaagagaatgaaattcaacatcctcctgacaacatacgagatcctcctcaaa
gacaaggtgggcctcttcgtcgcaccttcatcactctcaggtgggaggcccggtctgccg
gtcctgtcgttcctgggcggcgtcaactgggccttcatcggcgtggacgaggcccaccgc
ctgaagaacgacgactcgctcctctacaagaccatgatggagttcaagtccaaccacagg
ctgctgatcacggggacgcccctgcagaactctctgaaggagctctggtccctcctgcac
ttcatcatgcctgacaagttccactcctgggagctgtttgaggaggagcacggcaaaggc
agggattcaggctacaccagtctgcacaaggagctggagcccttcctgctgcgccgggtc
aagaaggacgtggagaagtcgctccctgccaaagtggagcagatcctgcgggtggagatg
agcgccatccagaagcagtattacaagtggatcctgaccaggaactacaaggccctgagc
aaaggcgtgaaaggcagcacctcgggcttcctcaacatcatgatggagctgaagaagtgc
tgcaaccactgctacctcgtcaggcccccggaggaggacttgaacaagagcgaagccctc
cagcaactggtccgcagcagcgggaagctggttctgctggacaagctgctgatccgcctg
aaggagcgcggccacagggtcctcatcttctcccagatggttcggatgctggatatcctt
gctgactatctgaggagccgccagttcctctttcagaggctggatgggtccatcaaaggg
gagatgaggaagcaggccttggaccacttcaacgccgagggctcagaggtgagaggacac
gccggctccgcctggccaggcagcaggagcagcctgacagcgcccgcccccctccctctg
tgtctccaggatttctgcttcctgttgtcgacacgagccggaggcctgggcatcaacctg
gcgtcagccgacacggtggtgatcttcgactcagactggaacccccagaatgacctgcaa
gctcaggccagagcgcacaggatcggacagaagagacaggtgaacatctaccggctggtg
accaaaggctcggtggaggaggacatcatcgagagggccaagaagaagatggtgctggac
caccttgtcatccagcggatggacaccacggggaaaacggtgcttcacaccggggcggcg
ccgtccagctcagcgcccttcaacaaggaggagctgtccgccatcctcaagtttggtgcc
gaggagctcttcaaggagcccgagggggaggagcaggagccacaggtaggtgccggcccg
gacggcggcgggcccctggcgcaggcccgctcaggcccggagatggacatcgacgagatc
ctgaagcgagcggagacccgggagaacgatcctggaccctccacggtgggagaggagctg
ctctcccagttcaaggtggccaacttctccatgatggaggatgaggaaatggactcggag
cgcagccagaggagctgggacgacatcatcccggaggagcagcggcggcggctggaggag
gaggagcggcagaaggagctggaggagatctacctgctgccgcgcatgaggaactgtgcc
aagcagatcagcttcaacgccgggccgggccggcagagccggagccggaggtactccggc
tccgaacagcgactccccgtcggaccgcaagcggcccaagaagcgggggcgtcctcgcac
catcccgcgggagaacatcaaaggcttcagcgacgccgagatccggaggtttgtgaagag
ctacaagaagtttggggaaccgctggagaggtgaggcttcgccggggttcgccgggcgtc
cgccaaggggcctcggctaaccccgctgctcctccaggctggacgccatcgctcgggacg
cggagctgtgtggagaagtcggagcacgacctgaagcggctggcggagacggtccacaac
ggctgcgtgaggacgctgcgggagaacccctgcgggccggagaaggcctcaggtgggacg
cctcccgggcctgtccgcacggcggagagggtgcgggggtggcaggagacacaggctcac
gctgccgtctgctccccagggggcaagcgggggaaggtgaaggggcccaccttcaggatc
tccggggtccaggtcaacgccaagctggtcatctcccacgagcaggaactggcccccctc
cacaaggccatccccgccgaccccgaggacaggaagaggtacgtgatcccctgccactcc
aaggcagcacactttgacatcgactggggcaaagaggacgactccagcctgctggtgggc
atctacgagtacggctacggcagctgggagatgatcaagatggacccggacctcaacctg
acccacaagctcctgccggatgatcctgataagaagcctcaggccaaacagttacagacc
agagccgactacctcatcaagctgctgagcaagcacctggccaggaaagaagcccacaag
caggcgggcacggccaactcacggaagaggaagccacgaagcaagaccagcaaaactgtg
aagccggccaagacggacgacgtgatgaagagcacctcctcggagccctcgtcagacaag
aggtccgacgaggacgaggaggaggaggaggacgaggaggcggaggagaaggagaaggag
aaggccaccgccgcggccaagacgctgagccggcgagcccgggaagccgcggcggccaag
gaggaagacgaagacgaaggccagcccaagcaggaggagcgctccccgtccggagagagg
gagctcaagcggagagagacgaggaaggagggcaagaaggacaagggcgacggctgggag
ggcaaggaggccaaagacgccaaggagcggaaggaggccaagcccgccgaggcggcccag
aggcacgaggacggcccggacaaggtggaggcgaagggcgaagggcgagagcgggccagg
aaggcctccgacgtgcccgtgcacatcacggccagcggagagcccgtgcccgtgtcggag
gagcccgaggagctggaccagaagaccttcagcgaggtgggtgtccgcctcgcccggccc
ggccccgccccgcccagcgcggggctaacgccggccctcccgctgcagtgcaaggagaag
atgcggccggtgaaggccgccctgaagcagctggaccggccggagaagggcctgtcggag
cgggagcagctggagcacacgcgccagtgcctgatcaagatcggagaccacatcaccggc
tgcctgcagaagtactccaaccccgacgagatcaagctctggaggaagaacctctggatc
tttgtctccaagttcaccgagtttgacgccaggaagctgcacaagctctacaagcacgcc
atcaagaagcggcaggagagcgcccaggccctggagcagaacaccaggatcatcaacacc
tacaactacaaacacccagacagcgacaggctgaaggacagcatccagcaggacgagagc
agcagggacagctgcggctcggacaggcacccgccctcagcccgccactacgagggcggg
aaggagcgccacgcctccgaggccctgaggaggggcgccgcagccgagcgcaagaggccc
caccccgccttcagcaacggcaaagaccaccgggacagggaccactacaggccggacagc
agggacagggacaggttctacggtgacggtaaacacaggaagctggacgagctgagctcc
agcagggaccaccggctggactccaaggatcacccccactcggagcaccgctccacctac
cggtaccactcagactggcagagcgaggcgcgcgcgggcggcggcagcggcggggggccg
cgctcgcccctggaccagcgctcgccctacgactcgcgctcgcccctgggccaccgctcg
ccctttgactcggaccacaggagcacgccggaacaaatgtggagcggcaggaagaca

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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