KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00017516G001
Entry
GSTEN00017516G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K08131  collagen type IX alpha
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04510  Focal adhesion
tng04512  ECM-receptor interaction
tng04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tng00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    GSTEN00017516G001
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    GSTEN00017516G001
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    GSTEN00017516G001
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:tng00535]
    GSTEN00017516G001
Proteoglycans [BR:tng00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   GSTEN00017516G001
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-ProteinID: CAF99439
UniProt: Q4SIU3
Position
21
AA seq 515 aa
PLNCPAGPKGPQGLQGVKGHKGRSGILGDPGSIGKTGPKGETGTSGEQGIPGPPGPMGLR
GYPGMMGPKGEAGPRGYKGIQGPVGIPGPPGEEGPQGPLGDSGDKGDKGSRGIQGPQGAV
GKKGENGLPGIDGKDGTPGIPGIKGAPGQAGMPGPPGPQGAAGLPGSPGAKGGPGDKGEA
GPRGPVGMSGAPGPLGEPGLPGEAGMEGVPGPKGDRGQRGEAGPQGIVGKPGGKGERGPI
GVPGAQGLSGTKGDKGFQGKVGSKGDVGDPGVEGLAGEKGEKGLSGEPGPKGQQGIRGDP
GHNGPTGDPGKPGDAGPPGLPGPRGLNGERGVPGMPGIQGPSGRDPSDQHIVEVVLKMLQ
ERLAAVAVSAKRAVLGGAGVMGPPGPPGPPGPAGPQGPHGLPGPRGIPGFIGGPGQIGNT
GLKGKRGPKGERGDPGKAHPGPPGLPGIQGPPGVDGVARDGRPGERGPQGSPGEAGHPGK
AGPAGLPGYCEAAMCLAASAYTSPRLQEAGTIKGP
NT seq 1545 nt   +upstreamnt  +downstreamnt
cctcttaactgtccagcaggacctaaaggcccccaaggactgcagggagtcaaaggacac
aaagggcggtctggtatcctgggagaccctggcagcataggaaaaacgggtcccaaagga
gaaactggcacctctggggaacaaggtatcccaggacctccgggtccaatggggctgagg
ggttatccaggaatgatgggtcctaaaggggaagcaggacctcgtggatacaaagggatc
cagggtcctgtaggaatacctggacctcctggtgaagaggggcctcagggaccactggga
gattcaggagacaagggagacaagggtagcagaggtatccagggcccacagggagcagtt
ggcaaaaaaggagagaatggtttaccaggtattgatggaaaagatggcacacctggtatt
cctggaataaagggcgctcctggccaggccggaatgcctggtcctcctggtcctcaagga
gcggcgggattgcctggcagtcctggtgcaaagggagggcctggagataagggtgaagca
ggaccccgaggcccagttggaatgtcaggtgcacctggaccactgggtgaacctggtctt
cctggtgaggcgggaatggaaggagttcctggaccaaagggagacagaggacagcgtgga
gaagcagggcctcagggaatcgtcggcaagccgggaggtaaaggagagagaggaccaatt
ggcgttccaggtgcccagggtctgagtggaaccaagggagacaagggcttccaaggcaaa
gttgggtcaaagggagacgttggagaccctggtgttgagggattggctggcgaaaaaggt
gaaaagggcttgtctggtgaaccggggcccaaaggacagcaaggaatacgaggggatccg
ggacacaacggacccaccggagaccctggtaaacccggagacgcgggaccaccaggattg
cctggtccgagggggctgaacggagagcgtggagttcctggaatgccaggaattcaggga
ccatcaggacgtgatccgtccgaccaacatatcgttgaagtggtcctgaagatgttgcag
gagaggctggcagcagtggccgtgagcgccaagagggctgtccttggtggggcaggtgtg
atgggaccgcctgggcctcctgggcctcctggcccagccggcccacagggaccgcatggt
ttacctggtcctcgtggcattcccggtttcatcggaggaccgggacagatcggaaacaca
ggacttaaaggaaagagagggccaaagggagagagaggagaccccggtaaagcccacccg
ggaccacctggacttccagggatacagggtcctcctggtgttgatggcgtggctcgggac
ggcaggcccggcgagagaggacctcaggggtcaccaggagaggccggtcaccccgggaag
gcaggacccgcaggtctcccagggtactgtgaggcagccatgtgcctggctgcatcagcg
tacacttccccaaggctacaggaggcgggaacgattaaaggaccc

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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