KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00022125G001
Entry
GSTEN00022125G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    GSTEN00022125G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tng03021]
    GSTEN00022125G001
   03036 Chromosome and associated proteins [BR:tng03036]
    GSTEN00022125G001
Transcription machinery [BR:tng03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     GSTEN00022125G001
   Coactivators
    SAGA/TFTC/STAGA complex
     GSTEN00022125G001
Chromosome and associated proteins [BR:tng03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     GSTEN00022125G001
    STAGA complex
     GSTEN00022125G001
    TFTC complex
     GSTEN00022125G001
    SAGA complex
     GSTEN00022125G001
    SLIK complex
     GSTEN00022125G001
SSDB
Motif
Pfam: TAF6_C TAF Histone TFIID-31kDa CENP-S CBFD_NFYB_HMF Bromo_TP
Other DBs
NCBI-ProteinID: CAG02888
UniProt: Q4S8Z4
Position
7
AA seq 599 aa
MAEERRQKQCSVVLPTESMKAMAESVGVGQLQEESCVALSEEVSYRIKEIAQDALKFMRH
GKRRKLTTSDIDNALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIEGMQPAIPENPPPVPKEQQKVESTEPLKVVKPGQEEDGTIQG
KAQGATAADGKGQKGEGPDTVEAAQTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIA
TDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPA
VVTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSLLDDK
TQWTTRYGCIAGLAELGPDVIKTLILPRLSVEGARIKAVMEGQVVSNIDKIGAEHVQSLL
LKHCASVIAKVRSPPDSVEHYRTDYGYLGPMLCSHVIKARTQAALQAQQVNRTTLTITQP
RPTLTVSQSGLSGSSGPRTPSIIKVPSSLTLMSPRPGTPSQPSPPAAKYIVMATSAGPAS
TQQVITISSSQSASPVTSTVPSATSTLQPLVKLESGSGPGLTASRPMQKYIVVSLPSTA
NT seq 1797 nt   +upstreamnt  +downstreamnt
atggcggaggaacgacggcagaaacaatgttccgtggtcctgccaacggagtccatgaag
gccatggcagagtctgttggagtgggacagttgcaggaggaaagctgtgttgccctgagt
gaagaagtcagctacagaataaaagagattgcacaggatgcactcaaattcatgcgtcat
gggaagagacgtaaattaactaccagcgacatagataatgctctcaaactaaaaaacgta
gagcctctgtatggctttcagtcacaagagtttatcccctttcgctttgcgagcggtggt
ggaagggagcttcatttttacgaggaaaaggaagtcgacctgagtgatatcattaacact
ccccttcccagagttccactagatgtatctctaaaagcccactggttaagtattgagggg
atgcagcctgctattccagaaaatccgccaccagttccaaaagaacaacaaaaagttgaa
tcaactgagcccctgaaagttgtcaaacctggtcaggaggaggacggaacaatccaaggc
aaagctcaaggggcaacagctgcagatggaaaaggtcagaaaggagaagggcctgatacg
gttgaagccgcgcagactcatgagctttctgttgaacagcagctctactacaaggagatc
acagaggcatgtgttggctcctgtgaagctaagagagctgaagctctccagagtattgct
actgatcctgggttgtatcagatgcttccaagattcagcacatttatatctgaaggggtt
cgtgttaatgtggtgcaaaacaacctggccctactgatttacctgatgcggatggtcaaa
gctctgatggacaaccccaccctgtatttggagaaatatctacatgagctcatcccagct
gtggtgacgtgcatcgtcagcaagcagctgtgcctgcggccggatgtcgacaaccactgg
gctctgcgcgactttgctgctcgcctcatggcccagagctgtaaaaccttcagtaccaca
accaacaacatccagtcccgaatcaccaagacttttaccaagagtttgctggatgacaaa
actcagtggacaacgcgttatggctgcatcgctggacttgctgaactcggacctgatgtt
attaagacgttgatccttcctcggctttctgtagagggtgctcgcatcaaagccgtaatg
gaaggacaagtggtctccaatatcgacaagataggagcggaacatgtccaaagcctctta
ctgaaacactgtgcaagtgttattgccaaggtccgatccccacccgacagtgtggagcac
tatcggacagactatggttacctgggacccatgctgtgctcccatgtaattaaggccagg
actcaagctgccctgcaggctcagcaagtcaacagaaccaccctaacaatcacccagcct
cgtcccactctcacagtctcgcagagcgggttaagcggttcgtcaggcccgcgcacacca
agcatcattaaagttcccagctccctcaccctgatgtcgccgcgtcctgggaccccatca
cagccctcgccaccagcagctaaatatattgtcatggcaacaagtgcagggcctgcctcc
acccagcaggtaatcaccatcagctcctcccagtcagcctcaccagtcactagcactgtt
cccagtgccacttccaccttgcagcctttggtgaaactggagtccggcagtggccccggg
ctgacagcctcccgaccaatgcaaaagtacatcgttgtatctctcccctcgactgcc

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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