KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00022790G001
Entry
GSTEN00022790G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03020  RNA polymerase
tng04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:tng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GSTEN00022790G001
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    GSTEN00022790G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tng03021]
    GSTEN00022790G001
Enzymes [BR:tng01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     GSTEN00022790G001
Transcription machinery [BR:tng03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     GSTEN00022790G001
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5
Other DBs
NCBI-ProteinID: CAG03415
UniProt: Q4S7G7
Position
13
AA seq 1171 aa
MEIFEAEFGDMSPQELAAPVNTVAEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPMWYLKSVTRLFKYILYELQNSHYHLSKFLCLFYRYLNIYVGMPDVEESF
NVTRPVSPHECRLRDMTYSAPITVDIEYTRGSQRIIRNALPIGRMPIMLRSSNCVLTGKT
PMEFAKLNECPLDPGGYFIVKGQEKVILIQEQLSKNRIIVDQDRKGAVGASVTSSTHEKK
SRTNMIVKQGRFYLRHNTLSEDAPIAIIFKGMGVESDQEIVQMIGTEENVMASFAPSLEE
CQKAQIFTQTQALRYLGNKVRRQRMWGGPKKTKMEEARELLASLILTHVPVKEFNFRAKC
IYLAVMVRRVILAQGDNKVDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSELKKIADQII
PKQRAAQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSFISALGMM
TRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDGPII
KLAFNLGVEDVNLLCGEELSYPSVFLVFLNGNILGVIRDHQKLVGTFRLMRRAGFINEFV
SISTNLTDRCVYISSDGGRLCRPYIIVKKGQPMVKNKHMEDLSQGYRNFEDFLHDGLVEY
LDVNEENDCQIALYEHMIHKDTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQ
AMGTIGYNQRNRIDTLMYLLAYPQRPMVKTKTIEIIEFEKLPAGQNATVAVMSYSGYDIE
DALILNKASLDRGFGRCLVYKNTKCTLRRYTNQTFDKVMGPMLDAATRKPIWRHNILDAD
GICSPGERVENKQVLVNKSMPTVTQTPLEGSTQTGQPQYRDVPICYKGSTDSYIEKVMIS
SNAEDAFLIKILLRQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDTGICPDIIMNPH
GYPSRMTVGKLIELLAGKAGVLDGRFHYGTAFGGSKVKDVCEDLIRHGYNYQGKDYVTSG
ITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMER
DCLIGYGASMLLLERLMISSDAFEVDVCGQCGLLGYSGWQVKLSHLDLECHYCKSSCQVS
SLRIPYACKLLFQELQSMNIIPRLKLSRYNE
NT seq 3513 nt   +upstreamnt  +downstreamnt
atggagatttttgaagcagagtttggcgacatgagtccccaggagctggcggctcctgtc
aacactgtagcggaaaaatggaagctgctgcctgccttcctgaaggttaaagggctagtg
aagcagcacattgactcattcaactacttcattaatgtagagataaagaagataatgaaa
gcaaatgaaaagattacaagtgatgctgatccaatgtggtatcttaagtcagtcaccagg
ctgtttaaatatatactgtatgaattacagaacagtcattatcatctcagcaaatttctg
tgtttgttttatagatatctaaacatctatgttggcatgcccgatgtcgaggaaagcttc
aatgtgaccaggccggtgtctccccacgagtgtcgtctcagagatatgacctactcggca
cccatcacggtagatattgaatacactcgaggtagtcagagaatcatccgcaacgcgctt
ccaattggaaggatgccaattatgttgcgaagctccaactgtgtgctaacaggaaagacg
ccaatggagtttgcaaaactcaacgagtgtccgctggatccagggggatattttatcgtg
aaaggtcaggagaaggtcatactgatccaggagcagctgtcaaagaatcgaatcattgtg
gaccaggacaggaagggagcagtgggagcctcggttaccagctccacccatgagaagaaa
agcagaactaatatgattgtcaaacaaggaaggttttacctgagacacaacacactgtca
gaagatgccccgatcgccatcatattcaagggtatgggtgtggagagcgaccaggagatt
gtgcagatgatcggcacagaggagaacgtcatggccagctttgctcccagcctggaggag
tgccagaaggcccagatcttcacacagactcaggcgctgcgatacctcggcaataaagtt
cgccgacagcgcatgtggggaggccccaagaagaccaagatggaggaagcccgtgagctg
ttagcgtccctcatcctcacgcatgttcccgtgaaagagtttaacttccgggccaagtgt
atttacctggctgtgatggtgaggagggtgatcctggctcagggagacaacaaggtggac
gacagggattactacggcaacaaacgccttgagttggctggacagcttttgtctctgctc
tttgaggatctgttcaagaaattcaactctgaactgaagaagattgcagaccagatcatc
cccaagcagagagcggcgcagtttgacgtggtgaaacacatgcggcaggatcagatcact
aacggcatggtcaacgccatatccaccggcaactggtctctgaaaaggttcaagatggac
cgccagggcgtcacccaggtcctgtctcgcctctccttcatctcagcgctgggcatgatg
accaggatctcctcgcagtttgagaagaccaggaaggtcagcgggccacgctctctgcag
ccgtcccagtggggcatgctgtgtccctctgacaccccagagggagaggcctgcggtctg
gtgaagaacctggctctgatgacacacatcaccaccgacatggaggacgggcccatcatc
aaactggcctttaatctcggggtggaagacgtcaacctgctgtgtggagaggagctctcc
tacccaagcgtctttcttgtcttcctcaatggtaacattcttggtgtgatccgagatcat
cagaagctggtgggcaccttccggctgatgcgcagggcaggttttatcaacgagtttgtg
tccatctccaccaacctgaccgaccgctgcgtctacatctcctctgacggaggccgtctg
tgccggccgtacatcatagtgaagaaaggacagccgatggtgaagaacaaacatatggaa
gatctgtcccagggctacagaaactttgaagactttctccatgatggcctggtggagtac
ttggacgtcaacgaggagaacgactgtcagatcgccctctacgaacacatgatacacaag
gacacaacacacttggagatcgaacccttcacgctgctgggcgtgtgtgccggtcttatt
ccttatcctcatcacaaccagtcgcccaggaacacataccagtgtgctatgggcaaacag
gcgatgggcaccattggctacaaccaaaggaaccgcatcgacactctgatgtacctgctg
gcctatcctcagaggcccatggtgaaaaccaaaaccatcgagattatcgagtttgagaag
ctgcctgctggacagaacgccaccgtggccgtgatgagctacagcggctatgacattgag
gacgctctgatcctgaacaaggcctctctggacagagggtttggccgatgcctcgtttac
aaaaacaccaagtgcaccctgcggcgttacaccaaccagacctttgacaaggtgatggga
cccatgctggatgccgccacgcggaaacccatctggcgtcacaacatccttgacgccgac
ggcatctgctcccctggtgagagagtggagaacaagcaggtgctggtgaacaagtccatg
ccaacggtcacccagacgccactggagggcagtacccagaccggtcagccccagtacaga
gacgtgcccatctgttataaaggctccacagactcgtacatcgagaaggtcatgatctcg
tctaatgccgaagatgccttcctcatcaagatccttctgagacagaccaggagaccggag
ataggagacaagttcagcagtcggcacggacagaaaggtgtgtgtggcctcatcgttcca
caggaggacatgccgttttgtgacacaggcatctgtccagacattatcatgaaccctcat
ggatatccctcccgaatgacggttgggaagctgattgaactgctggcggggaaggcgggg
gtcctggacggaaggttccactacggcacggcgtttggtggcagcaaggtgaaggacgtg
tgtgaggatctcattcgccatggttacaactaccagggcaaagactacgtcacgtctggg
atcactggggaacctctggaagcgtacatctacttcggacccgtgtattatcagaaactg
aagcacatggtcctggataagatgcacgccagagccagaggccccagagccgttctcacc
aggcagccgacggaaggccgctctagagacggaggcctgcgtctgggggagatggagcgc
gactgcctgatcggctacggagccagcatgctgctgctggagcgcctcatgatttccagc
gacgccttcgaagtggacgtgtgtgggcagtgtggcctgctgggatactccggctggcaa
gttaaactttcccacctcgacctggagtgtcactactgtaagtcctcctgtcaggtctcc
tccctgcgaatcccctacgcctgcaagctgctcttccaggagctgcagtccatgaacatt
atccccaggctcaagctgtcccgctacaacgag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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