KEGG   Thioalkalivibrio nitratireducens: TVNIR_2609
Entry
TVNIR_2609        CDS       T02408                                 
Symbol
murE_[H]
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
tni  Thioalkalivibrio nitratireducens
Pathway
tni00300  Lysine biosynthesis
tni00550  Peptidoglycan biosynthesis
tni01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:tni00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    TVNIR_2609 (murE_[H])
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    TVNIR_2609 (murE_[H])
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:tni01011]
    TVNIR_2609 (murE_[H])
Enzymes [BR:tni01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     TVNIR_2609 (murE_[H])
Peptidoglycan biosynthesis and degradation proteins [BR:tni01011]
 Precursor biosynthesis
  Amino acid ligase
   TVNIR_2609 (murE_[H])
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase RraA-like Methyltransf_28
Other DBs
NCBI-ProteinID: AGA34250
UniProt: L0DZ56
Position
complement(2701283..2702770)
AA seq 495 aa
MPLHRLLPDREGLPDVAVHDLSQRSQVLSPGAAFVALRGTRAHGLAWAPDALKRGAAVVL
WDEDGTVPAGDPRYVHVPGLRRRLPEIAERLFGAWPADRPLVAITGTDGKTSVSHQVAVA
LSGLGLRCAVIGTLGVGAPGALAPTGLTTPDVLELHRHLAELAREGFAAVALEASSHALE
QGRLDGLRPTVAVLTQLGRDHLDYHGSLSAYADAKARLFRMPGLQALVLNVDDDFGRRLH
REHCGGDGALECWTYGLRGEQQPGERHVLARDLRATERGLEFEAVIGARSGRVAVPLFGV
FQASNLLATLGTLLALGHPAERALAALAGTRGVPGRMERFARANGAALVVDYAHTPSALE
AALNALRPHAQRRIWVVFGCGGNRDPGKRPAMGEVASRLADVVIVTDDNPRDEPPEVIRR
AVLDGCSGPARTLEIGDRAEAIRTAAAEADPGDVVLIAGKGHETVQIIAGREYPFSDREL
AAALAARAPGPEGNA
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgccgctgcatcgcctgctgccggaccgggaggggttgcccgatgtcgcggtccacgac
ttgagccagcgcagccaggtgctgagtcccggtgccgccttcgtggccctgcgcggaacc
cgggcgcacggtctggcctgggcgccggacgccctgaagcggggtgcggcggtcgtgctc
tgggacgaggatggcacggtccccgccggagacccgcgctacgtccacgtgcccgggttg
cggcgccgtcttcccgaaattgcggagcggcttttcggggcctggcctgccgaccggccg
ctggtcgcgatcaccggtaccgacggcaagacctcggtcagccaccaggtcgcggtcgca
ctcagcggtctggggctgcgctgcgcggtgatcgggacgctgggagtcggtgccccgggc
gcgctggcgccgaccggcctgacgacgccggacgtgctggagctgcaccggcacctggcg
gagctggcgcgggagggattcgccgcggtggcgctggaggcgtcgtcgcacgcgctggag
cagggccggctggacgggctgcgtccgacggtggcggtgctgacccagctggggcgcgat
catctcgactaccacgggtcgctgtcggcctatgccgatgccaaggcccgcctgttccgg
atgcccggcctgcaggcactggtgctgaacgttgacgacgatttcgggcgtcgattgcac
cgtgagcattgcggcggcgacggggccctcgagtgctggacctacggcctgcgcggcgaa
cagcaacccggggaacgtcatgttcttgcacgcgatctgcgcgccaccgagcggggtctg
gagttcgaggcggtaatcggtgcgcgcagcgggcgggtggccgtgccgctgtttggggtt
ttccaggcctccaacctgctggccacgctggggacgctgctggccttggggcatccggcc
gagcgggcgctggccgcgctggcgggaacccggggggtgccgggccggatggagcgcttc
gcacgggcgaacggggcggcactggtcgtcgactacgctcacaccccgtcggcgctggag
gctgcgctgaacgcactgcgaccgcatgcgcagcggcggatctgggtcgtgttcggctgc
ggcggcaaccgtgaccccggcaagcgcccggcgatgggcgaagtcgcgagccggctcgcc
gacgtggtgatcgtgaccgacgacaacccgcgcgacgagccgccggaggtgatccgccgg
gcggtcctggatgggtgcagtggccccgcgcggaccctcgagatcggcgaccgcgccgag
gcgatccggacggccgcggccgaggccgatcccggagacgtcgtgctgatcgctggtaaa
ggccacgaaacggtgcagatcatcgccgggcgggagtatccgtttagcgaccgggaactg
gccgcggcactggcggcccgggccccagggccggaggggaacgcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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