KEGG   Thioalkalivibrio nitratireducens: TVNIR_2963
Entry
TVNIR_2963        CDS       T02408                                 
Symbol
truD_[H]
Name
(GenBank) tRNA pseudouridine 13 synthase
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
tni  Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:tni00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tni03016]
    TVNIR_2963 (truD_[H])
Enzymes [BR:tni01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     TVNIR_2963 (truD_[H])
Transfer RNA biogenesis [BR:tni03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    TVNIR_2963 (truD_[H])
 Prokaryotic type
    TVNIR_2963 (truD_[H])
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: AGA34600
UniProt: L0E067
Position
complement(3055465..3056487)
AA seq 340 aa
MYPWGLPLLARIKACPEDFVVDEIPATQPSGEGTHVWLQIRKVGRNTEDVAEWLARAAGV
ARVAVGYAGRKDRLAVTTQWFSVDLAGRQEPDWNGTVPDGVEILDRRRHARKLKTGHLRG
NRFRLRLRAVRGDRQAADALLGRIRERGLPAYFGEQRFGHANLERARAWFAGRTRPRSRN
QRGLYLSAARAAIFNEVLGRRVREGTWDRLLAGDLANLDGRGSVFPVPVVDAELEARCAR
LEIHPTGPLWGRGGPGSDGEALALEREVAGALRDLADGLEREGLDPARRPLRLRPRNLAW
AWLEPDMLQLEIELGPGEYATGVAEAIAHLAETARSDPSA
NT seq 1023 nt   +upstreamnt  +downstreamnt
gtgtatccctggggcctgccgctgctggcgcgcatcaaggcgtgcccggaggatttcgtg
gttgacgagatcccggcgacgcagccctccggcgagggcacgcatgtctggctgcagata
cgcaaggtgggccggaacaccgaggacgtggccgaatggcttgcgcgtgccgcaggcgtg
gcgcgcgttgcggtcggctatgccgggcgcaaggaccgccttgcggttaccacccagtgg
ttcagcgtcgacttggccgggcggcaggagccggactggaacggcacggttccggacggg
gtggaaatcctcgatcgccggcgccatgcccgcaagctgaagaccggccatctgcggggc
aaccgcttccggctgcggctgcgcgcagtccggggcgaccggcaggccgcggacgcactg
ctcggacggatccgcgagcgggggctgccggcctatttcggcgaacagcgcttcgggcat
gccaacctggaacgcgcgcgggcctggttcgccggccggacccgtccgcgcagtcgcaac
cagcgcggcctgtatctttcggcggcccgggcggcgatcttcaacgaagtgctgggccgg
cgggtccgcgaaggaacttgggaccggctgctggccggcgacctggccaatctggacggg
cgggggagcgtgttcccggtgccggtggtcgacgcggaactggaggcacgctgcgctcgg
cttgagatccacccgaccgggcctctctggggtcggggcgggccgggcagcgatggcgag
gcgctggctctggaacgcgaggtggccggcgcactccgggacctcgccgacggccttgaa
cgcgagggcctggacccggcccggcggccactgcggcttcgaccccgaaaccttgcctgg
gcctggcttgaacccgacatgctgcagttggaaatcgagctgggccccggcgaatacgcg
accggcgtcgccgaagcgatcgcccatctcgccgagaccgcccgctccgacccgtctgcg
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system