KEGG   Thioalkalivibrio nitratireducens: TVNIR_3132
Entry
TVNIR_3132        CDS       T02408                                 
Symbol
rlmE_[H]
Name
(GenBank) Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E
  KO
K02427  23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
Organism
tni  Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:tni00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tni03009]
    TVNIR_3132 (rlmE_[H])
Enzymes [BR:tni01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.166  23S rRNA (uridine2552-2'-O)-methyltransferase
     TVNIR_3132 (rlmE_[H])
Ribosome biogenesis [BR:tni03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    TVNIR_3132 (rlmE_[H])
SSDB
Motif
Pfam: FtsJ Methyltransf_31 Methyltransf_23 Methyltransf_25 Methyltr_RsmB-F
Other DBs
NCBI-ProteinID: AGA34769
UniProt: L0DYV4
Position
complement(3237843..3238469)
AA seq 208 aa
MPKRSKSSQRWLKEHFDDRFVTRAQQEGYRSRAVFKLEEIDRRERLLRRGLRVVDLGAAP
GGWSQYAADRVGPTGRVVASDILSMDPIPGVDIVTGDFREQAVLEGILAALGDERADLVL
SDMAPNLSGTDAVDQPRAIHLCELALDLALRVLKPNGAFLVKLFQGQGSDEYLRELRLRF
RRVAVRKPQASRPRSREVYVLARELRDV
NT seq 627 nt   +upstreamnt  +downstreamnt
atgccgaaacgcagcaagtccagccagcgttggctgaaggaacattttgacgaccggttc
gttacgcgcgcccagcaggaggggtatcgctcgcgcgcggtcttcaagctcgaggagatc
gaccggcgcgagcgcctgctgcgccggggcctgcgggtcgtcgacctgggtgccgccccg
ggggggtggagccagtacgcggcggaccgggtcgggcccaccggccgcgtggtggcctcg
gatatcctgtccatggatccgattcccggggtcgacatcgtgaccggcgacttccgcgaa
caggcggtgctggaggggattcttgcggcgctcggtgacgaacgcgcagaccttgtactt
tccgacatggcccccaatctctcgggtacggatgcggtcgaccagccgcgcgccatccac
ctctgtgaactggcgctcgacctcgcgctccgtgtgctgaaaccgaatggtgcttttctc
gtcaaactgtttcaggggcagggttccgacgaatacctgcgcgagcttcgcctgcggttc
cgccgcgtggcggtgcgcaagccccaggcgtcgcgcccacggtcacgggaagtgtatgta
ttggcgcgggagctgcgggatgtgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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