KEGG   Thermotoga petrophila RKU-10: Tnap_0459
Entry
Tnap_0459         CDS       T01139                                 
Name
(GenBank) metallo-beta-lactamase superfamily hydrolase-like protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
tnp  Thermotoga petrophila RKU-10
Pathway
tnp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tnp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Tnap_0459
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tnp03019]
    Tnap_0459
Messenger RNA biogenesis [BR:tnp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Tnap_0459
SSDB
Motif
Pfam: Lactamase_B_2 RMMBL Lactamase_B
Other DBs
NCBI-ProteinID: ADA66555
UniProt: D2C6G9
Position
complement(464853..466421)
AA seq 522 aa
MRIEILDGHRNIGGNKIRVVDSENDGFLLDFGLNFSRWGEFFEEFLNPRTGKILHDLLKL
EMVPRLNIYRDDLFDGKFEDPVNHAFLFLSHAHADHTGMVGLIDEKIPLLMTGETFAVMR
ASVYTSNSNVLTQLGGKKRRRVSDKDLENGIREDLTVSPGNSKSAERLTRRVSFPKEVEL
NDDSTVVDMNSLWKNELFVEPVYHSVIGAAGLAARVDDLWLAYTGDFRTGPETAEEERYW
LDTLGEKRLALSLRTSRFFENLKDKRPLVLIVEGTRVTREENVENTEKDVFENAMRVFRG
TKNLILVDFPIRHLERLFTFLKVCMENDRRLVLMPKDYAYLLEMERVEPLWKLTDEERSF
VRVYHPGKVTYINLEKDALLRAKEEGILLSPEEINLHPEKHTMVAGYWDFPHILDLDERV
LNGAVYIHSTSEAYTEEQEIDARRFMNWLRYFNIVPFGIREVNGNIVFTKEFHASGHVSP
QGLEKILNELNPDYIVPVHTLNPGWFVERWDERVLLENVIVL
NT seq 1569 nt   +upstreamnt  +downstreamnt
gtgagaatagagatactcgacgggcacagaaacatagggggaaacaagatcagagtggtt
gattctgagaacgacggttttctgctggattttggattgaacttttccagatggggagag
ttcttcgaggagtttttgaaccccagaacaggtaagatccttcatgacctgctgaagctc
gaaatggttccccggctcaacatttacagggacgacctcttcgatggaaagttcgaagat
cctgtgaaccacgcctttctttttttgagccatgcgcatgcggatcacaccggaatggtg
ggcctcatagacgaaaagatccccctcctcatgaccggcgaaaccttcgctgtgatgaga
gccagtgtgtacacgagcaactcaaacgttctgactcagctcggtggaaagaaaagaaga
agggtctcagataaagatctggaaaacggaatccgcgaagacctcacggtgagcccggga
aattcgaagagcgcggaaagattgacaagacgcgtttcttttcctaaagaggtcgaactc
aacgacgattcaactgttgtcgatatgaactccctgtggaagaacgagctgttcgttgaa
cctgtgtaccactccgtcataggagccgcgggccttgcggcaagggtggacgatctctgg
ctcgcttacaccggagacttcagaacgggtcccgagacagcagaagaagagcgctactgg
ctggacactctcggtgaaaagagactcgcgctttctctcaggacctcgagattttttgag
aatctgaaagacaagcgcccgctcgttctcatcgttgagggaaccagagtcacgagggaa
gagaacgtggagaacacggaaaaggacgtcttcgaaaacgcgatgagagttttcaggggg
acgaagaatctgatactcgtagattttcccatcagacacctggagaggctcttcaccttc
cttaaggtctgcatggaaaacgacagaagactcgttctcatgccaaaagactacgcctat
cttctcgagatggaacgagtggaaccactctggaagctgacggatgaggaaaggtccttc
gttcgtgtgtaccaccccgggaaggtcacctacataaacctcgaaaaagacgcactgctt
cgagccaaagaggaagggatccttctctcaccagaggagataaacctgcatccagaaaaa
cacaccatggttgcgggatactgggacttcccgcacatcctcgatctcgacgaaagagtt
ctgaacggcgccgtctatatccactcaacgagcgaagcctacacggaagagcaggagatc
gacgcaaggcgcttcatgaactggctcaggtacttcaacatagttcctttcggtataaga
gaagtgaacggaaacatcgtcttcacgaaagagttccacgcctcgggccacgtttctcct
cagggcctggaaaagattttgaacgaactgaacccggattacatagtgcccgttcacacc
ctgaatccgggctggttcgtcgagcgctgggatgaaagggtcttacttgagaatgtgatt
gtgttataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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