KEGG   Thermosediminibacter oceani: Toce_0637
Entry
Toce_0637         CDS       T01289                                 
Name
(GenBank) ribosomal small subunit pseudouridine synthase A
  KO
K06183  16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Organism
toc  Thermosediminibacter oceani
Brite
KEGG Orthology (KO) [BR:toc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:toc03009]
    Toce_0637
Enzymes [BR:toc01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.19  16S rRNA pseudouridine516 synthase
     Toce_0637
Ribosome biogenesis [BR:toc03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    Toce_0637
SSDB
Motif
Pfam: PseudoU_synth_2 S4 DUF5818
Other DBs
NCBI-ProteinID: ADL07409
UniProt: D9S1Y2
Position
complement(640830..641561)
AA seq 243 aa
MAEKTERLDKVLSMAGYGSRKDVKKIIKRGEVEVNGRVVTDAGTPVAPAVDSISVSGELL
IFKEHIYIMMNKPQGVISATHDRRETTVIDLLEDEFSHRNLFPVGRLDKDAEGLLLLTDD
GQLAHRLLSPRKKVEKVYYVEVKGRLVEEDVKAFKEGVFLGDYRALPAKLEILEAGEVSS
ALVTIYEGKFHQIKRMMKARGKEVTYLKRLSMGPLKLDENLEPGEWRELTDEEIRILTEA
VNL
NT seq 732 nt   +upstreamnt  +downstreamnt
atggctgaaaaaacagagcgtcttgacaaggtcctcagtatggcaggttacggcagccgc
aaggatgtgaagaaaataataaagcggggagaagtagaggtgaacggccgggtcgtcacc
gatgccggtacaccggtggcccctgccgttgattccataagcgtttcgggcgagctgctg
attttcaaagaacatatctacatcatgatgaacaaaccccaaggagttatttccgccacc
cacgacaggcgagagaccacggtaatagacctgctggaagatgaattctcccacagaaat
ctatttcctgtaggaaggcttgacaaggacgcggaaggactgctccttctcaccgacgac
ggccaactcgcccacaggctgctatcccccagaaaaaaagtcgaaaaggtctactacgtg
gaagtaaaaggtcgccttgtagaggaagacgtcaaggcctttaaagaaggcgttttcctt
ggggattacagggcgctcccggcaaaactggaaatactggaagccggagaggtttcttcg
gctctggtaacaatatacgaaggcaagttccaccagatcaagcggatgatgaaagccaga
ggcaaagaagtgacttacctgaagcgcctttcaatggggcctttaaagctggatgaaaac
ctggagccgggtgagtggcgcgaactcaccgatgaggagataaggattttaacggaggcg
gtaaacctgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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