KEGG   Thermosediminibacter oceani: Toce_0950
Entry
Toce_0950         CDS       T01289                                 
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
toc  Thermosediminibacter oceani
Pathway
toc00470  D-Amino acid metabolism
toc00550  Peptidoglycan biosynthesis
toc01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:toc00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Toce_0950
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Toce_0950
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:toc01011]
    Toce_0950
Enzymes [BR:toc01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     Toce_0950
Peptidoglycan biosynthesis and degradation proteins [BR:toc01011]
 Precursor biosynthesis
  Amino acid ligase
   Toce_0950
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C MurD-like_N 2-Hacid_dh_C Mur_ligase Pyr_redox_3 AlaDh_PNT_C PrpR_N DUF354 MurD_N NAD_binding_7 DUF1611 Pyr_redox
Other DBs
NCBI-ProteinID: ADL07712
UniProt: D9S2T5
Position
942165..943523
AA seq 452 aa
MELRGKKVLIVGLARSGVAAAIELSGMGAKVTANDIKTKEQMEETVEKLSSKGIELVLGG
HPLKLLDDTDLIVVSPGVPSDIPLLKEARERNIPVVSELEVGYWFTKAPIIAITGTNGKT
TTTTLIGEILKNDGKNISVAGNIGTPLIQEADKNGSKDYIVVEVSSFQLENIVRFKPKIS
VILNITEDHLNRHKTFENYIEAKARILENQDEEDFTVLNYDDPIVASLEKRARSKIVFFS
RKQELQEGVYVKNDVIVIRENGNIYPILKAKELGIKGSHNLENALAAVAVAWITKANLNN
LAETLKDFHGVEHRLEYVDTIDGVKFINDSKGTNPDAAQKALEAVDGPIILIAGGYDKKV
DFRPFVRSFFGKVKKVVLIGATADQIERTAREEGFFEVEKAASMREAVEIAKRSAEPGDT
VLLSPACASWDMFSNFEERGRVFKEAVRSLKA
NT seq 1359 nt   +upstreamnt  +downstreamnt
atggaattaaggggtaagaaagttttaatagtaggacttgcaagaagcggcgttgctgca
gctattgaactttcgggaatgggggctaaagttacagcaaacgatataaagactaaagaa
cagatggaagaaaccgtggagaagcttagttccaagggtattgaacttgtccttggggga
caccctttgaagctgctagatgatactgatcttatcgtggtaagcccgggggtgcccagc
gatatcccactcttgaaagaagcgagggaaaggaatatccccgtcgttagcgagttggaa
gtgggatactggtttacaaaggcaccgataattgcgattacgggaaccaacgggaaaacg
acgacgaccaccctcataggcgagatactaaaaaacgacggaaaaaacatttcggtggcg
ggaaacattgggacgccgctgatacaggaagccgataaaaacgggagcaaggattacatt
gttgtggaagtaagcagcttccagcttgaaaatatagtacgcttcaagccaaaaataagc
gtaattttaaacataaccgaagatcacctgaaccggcataagactttcgaaaattacata
gaagccaaagccagaattctggagaatcaggacgaagaagattttacggttttaaattat
gatgatccgattgtagcatcactggaaaagagggccaggagtaagattgtgttttttagc
cgaaaacaggaacttcaagaaggtgtttatgtgaaaaacgacgtaattgtcataagagaa
aacggtaatatatacccgattttaaaagcaaaagaactgggaattaagggctcacataac
ctggaaaacgcccttgctgccgtagcggtcgcatggataacaaaggcgaatttgaacaac
cttgctgagacccttaaggattttcatggggtggagcatcgcctggaatatgtggatacc
atcgacggcgtaaagttcattaatgactcaaaaggaacaaatccggatgcggcccaaaaa
gccctggaagctgtggatggtcctataatccttatagccggaggatatgacaaaaaagtt
gatttcaggcccttcgtcaggtcgttttttggcaaagtgaagaaagttgtcctaataggg
gccaccgccgatcaaatagaaagaaccgccagagaggagggttttttcgaggtagagaag
gcggcatcaatgcgcgaagcggttgaaattgccaaaaggtccgccgaacccggtgatacg
gtactcctttcgccggcgtgtgccagctgggatatgttttccaactttgaagagcgcggg
cgggtttttaaagaggcggtacgttctctgaaagcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (58)   
   KEGG ORTHOLOGY (1)   
   RefGene (55)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (87)   

Download RDF
DBGET integrated database retrieval system