KEGG   Thermodesulfobacterium geofontis: TOPB45_1161
Entry
TOPB45_1161       CDS       T01547                                 
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
top  Thermodesulfobacterium geofontis
Pathway
top03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:top00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TOPB45_1161
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:top03019]
    TOPB45_1161
   03016 Transfer RNA biogenesis [BR:top03016]
    TOPB45_1161
Enzymes [BR:top01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     TOPB45_1161
Messenger RNA biogenesis [BR:top03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     TOPB45_1161
Transfer RNA biogenesis [BR:top03016]
 Prokaryotic type
  tRNA degradation factors
   TOPB45_1161
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase KH_1 S1 KH_2 PHA01746 F-box-like_2
Other DBs
NCBI-ProteinID: AEH23249
UniProt: F8C694
Position
1159348..1161456
AA seq 702 aa
MERLEVEIGSSAPIIIETGEYARFSDGAVIVKQGDTAVLVTAVMGENLVEGIDFVPLSVD
YREQSSAWGKIPGGFIKREGKPTDREVLVSRLIDRSIRPLFPEGFFYDVVVTALTLSADE
KFDPDVLSIIGASTALHISKIPFEGPLAGIRIARIDGEFLINPTYEERQKADLDLVVACS
KDAIVMVEGGGKEVEEKVVIDALYLALTKCQALISAQENLRNQIGIPKKEIEILNLPEEL
INRLNEFCYNKIIKALEIPDKKLRKEELNKILEEFIASLENQEINKVALSYFYKKLVSQI
LRKKLFEEGKRIDGRTPDEIRPIEIKIHPFERPHGSAIFTRGQTQVFATVTLGSPEEAQM
VESIYEGETFKRFMLHYNFPPFSTGEARPWGPPRRREIGHGALAERALEPLIPPEDTFPY
IIRIVANVLESNGSTSMATVCAGSLALFDAGVPVSKHVAGIAMGLVMEEDKYIILTDILG
EEDQLGDMDFKVAGTKEGITSIQMDIKIKGLKKEIMEEALLKAKKARLFILEKMYSAIPE
PRKELSPYAPKIEIITVPEDKAFLIIGPGGKTVKEIREKTNTIIWVLEGGKVSITGKTKE
DIEAAKREIEAIIAEIEIGKIYEGKITRIEPYGLFVEVFPGKIGLLHISKMENPPKDLKS
AYSIGEKIRVKVLEFDELGRPRFTTKFDSEEGLTDERGGPIL
NT seq 2109 nt   +upstreamnt  +downstreamnt
atggagagattggaggttgaaattggttcttctgcgccgattataattgaaactggtgaa
tacgccagattttctgatggagcagtaattgttaaacaaggagatactgcagttttggtt
actgcagttatgggagaaaatttagttgaagggatagattttgtcccgctttcagttgat
tatagagagcaatcctctgcatggggtaaaatccctggaggatttataaaaagagaaggg
aaaccaactgatagagaggttttagtttcccgtctaattgatcgttctataagacctctt
tttcctgaaggttttttctatgatgtagtggtaacagctttaactttatctgctgatgag
aaatttgatcctgatgttctctcaattataggagcctcaacagcattacatatttctaaa
attccttttgaaggtcctttagcaggtataaggatcgctagaatagatggagagttttta
atcaatcctacctatgaagaaagacaaaaggcagatttagatttggttgttgcctgttcc
aaagatgcaattgttatggttgagggaggaggaaaagaggttgaagaaaaagttgttata
gatgctctttatttggctttaacaaaatgtcaagctttaatatctgcccaagagaatcta
agaaatcaaataggtatccctaaaaaggagatagaaattcttaatttaccagaggaacta
ataaataggctaaatgaattttgttacaataaaataataaaagctttagaaattccagat
aaaaagttgagaaaagaagaacttaataaaattttagaagaatttattgcgagtttagag
aatcaagagattaataaggtagctcttagttatttttataaaaaattagttagccaaatt
ttaagaaaaaaactttttgaagaagggaaaagaattgatggaagaacccctgatgaaata
agaccaatagagataaaaatccatccctttgaaagacctcatgggagtgccatttttacc
agaggacaaacccaggtatttgctactgttaccttaggttcacctgaagaagcacaaatg
gttgaaagtatctatgaaggagaaacttttaaaagatttatgctccactataattttcca
cctttttctacaggggaggcaagaccctggggaccaccaagaagaagagaaataggacat
ggggctttagctgaaagagcacttgaacccttaattccaccagaagatacctttccctat
attattagaattgtagctaacgttcttgaatctaatggttccacttctatggcaactgtg
tgtgcaggttctcttgctttatttgatgcaggagttcctgtaagtaaacatgtagctggg
attgcaatgggacttgtgatggaggaagataaatatattatcttaacagatattttagga
gaggaagatcaattaggagacatggattttaaagttgcaggtacaaaagaaggaattaca
agtattcaaatggatataaaaataaaggggttaaaaaaagaaattatggaagaagcgtta
ttaaaagctaaaaaggcacgtttatttatattggaaaaaatgtattcagcaattccggag
cctcgtaaggaactttcaccttatgctcctaaaattgaaattataactgttccagaagac
aaagcattcttaattataggtccgggaggaaaaactgtaaaagaaataagagaaaaaact
aacactataatatgggttcttgagggaggaaaagtttctattactggaaaaacaaaagaa
gatatagaggcagcaaaaagagaaatagaagctataattgctgaaattgagataggtaaa
atttacgaaggaaagataacaagaatagaaccttatggactttttgtagaagtattccct
ggtaaaataggtcttttacatatttctaagatggaaaatcctcctaaggatttaaaatca
gcttatagtattggagaaaaaataagggtaaaggttttagaatttgatgaacttggaaga
ccaagatttactactaaatttgatagtgaagaaggtttaacagatgaaagaggaggacca
atactttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (29)   

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