KEGG   Thermus oshimai: Theos_0305
Entry
Theos_0305        CDS       T02346                                 
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
tos  Thermus oshimai
Pathway
tos03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Theos_0305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tos03021]
    Theos_0305
   03400 DNA repair and recombination proteins [BR:tos03400]
    Theos_0305
Enzymes [BR:tos01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Theos_0305
Transcription machinery [BR:tos03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Theos_0305
DNA repair and recombination proteins [BR:tos03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Theos_0305
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD HHH_5 RNA_pol_L_2 RAD51D_N HHH_8
Other DBs
NCBI-ProteinID: AFV75381
UniProt: K7QTQ9
Position
271398..272336
AA seq 312 aa
MLESKLKAPVFTVRTQGREYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYIED
VLHEFSTIPGVKEDVVEIILNLKELVVRFLDPKMQTATLLLKAEGPKVVRAADFVPQADV
EILNPDLPIATLEAGGRLHMEVRVDRGVGYVPAERHNTKDRINAIPVDAIFSPVRRVAFQ
VEDTRLGQRTDLDKLTLRIWTDGSITPMEALEQAVNILKEHLSYFANPQTTALPEEAPAP
KLEEKEEELDLPLEELGLSTRVLHSLKEEGIESVRALLALNLKDLKNIPGIGERSLEEIR
EALEKRGFTLKE
NT seq 939 nt   +upstreamnt  +downstreamnt
atgttagagagcaagctgaaagccccggtctttaccgtgcgcacccaggggcgggagtac
ggggagttcgtcctcgagcccctggagcggggcttcggggtgaccttggggaacccccta
aggcgcatcctcctctcctccatcccgggcaccgcggtcaccagcgtctacattgaggac
gtcctccacgagttctccaccatccccggggtgaaggaggacgtggtggagatcatccta
aacctcaaggagctggtggtccgcttcctggaccccaaaatgcagaccgccaccctcctc
ctcaaggcggaagggcctaaggtggtgcgggcggcggacttcgtgccccaggcggacgtg
gagatcctgaaccccgacctgcccatcgccaccctggaggcgggggggaggctccacatg
gaggtgcgggtggaccggggggtgggctacgtgcccgcggagcgccacaacaccaaggac
cgcatcaacgccatccccgtggacgccatcttctccccggtgcgccgggtggccttccag
gtggaggacacccgtctgggccagcgcacggacctggacaagctcaccttgcgcatctgg
actgacgggtccatcacccccatggaggccctggagcaggcggtgaacatcctgaaggag
cacctctcctacttcgccaacccccagaccaccgccctccccgaggaggcccccgccccc
aagctcgaggagaaggaggaggagctggacctccccttggaggagctcggcctttccacc
cgcgtcctccacagcctgaaggaggaggggatcgagtccgtgcgggcccttctggccctg
aacctcaaggacctgaagaacatccccggcatcggggaaaggagcctggaggagatccgc
gaggccctggagaagcggggcttcaccctgaaggagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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