KEGG T.pallidum: TP0102

Treponema pallidum subsp. pallidum Nichols: TP0102

Entry

TP0102 CDS T.pallidum

Definition rep helicase, single-stranded DNA-dependent ATPase (rep)

Orthology K03656 ATP-dependent DNA helicase Rep [EC:3.6.1.-]

Class Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: UvrD-helicase Viral_helicase1 DUF2379
PROSITE: UVRD_HELICASE_ATP_BIND UVRD_HELICASE_CTER

Other DBs NCBI-GI: 15639096
NCBI-GeneID: 2610806
UniProt: O83140

Position complement(109750..111723)

AA seq 657 aa
MLSTLNPEQRRAVTTLEGPLLIIAGAGSGKTRVITARIAYMLECGILQSRILALTFTNKA
AHEMSERIKALTGKPLRNTTVSTFHAFGVTILREHIHVLGWRKNFSIYDENDKRALIREA
AKEVHLLPEVLDTNCVSTLFSAIKMQRKNLKELQHKERALWHEYHTALKLFNAVDFDDLI
VLPIQIFSEYPDILASYKSRYHYILVDEFQDTSAQQYRLMKMLATQNICVVGDDDQSIYS
WRGAHHDNILSFEKDFPYATEITLEQNYRSTGTILAAANGVIAHNTQRKEKALWSGNDSG
KPIEIFNPETERDEAIFIANTILAEQIRASYSFSSFGVLLRTNSFMRIIEDVFLQENIPY
RVSGGMSFFQRKEIKDVLSYLRVISNPDDDVNLLRIINTPRRGIGKKTLHLVSDIANTQQ
CSVFNALNQIINKTHAVDLKESHRTAVENFLQLITQARTHLLSGKNLAYKVRKFVEDIQY
FNYLIQEFQKNEHAARFKFLQIEHLVESIEHWEQSSEHGSLYDYLNRVTLLARDNVQKET
EGAVSLMTIHASKGLEFPVVFIAGVEAGTIPHERSIEEVHSIEEERRLFYVAITRAKEKL
YLTHCRTRKRGGKREERTASPFLDEIPKHLVRAHAPEGKISEEEVTRAFTRIKKLFT

NT seq 1974 nt +upstreamnt +downstreamnt
atgctctctacacttaatcctgagcaacgtcgagccgttaccacacttgagggaccgctt
ctcattatcgccggcgcaggctcagggaaaacgcgcgtaatcacggcgcgcatcgcgtat
atgctcgaatgcggtattctgcaatcgcgcattcttgcactgaccttcactaacaaggcc
gcacacgagatgtctgaacgtattaaagctctcacgggcaaacctttacgcaacacgacc
gtcagtacttttcacgcttttggcgttacgattttgcgagaacatatccatgttctcggc
tggaggaagaactttagcatttatgatgaaaatgataaacgtgctctcattcgcgaagca
gcaaaggaagtacatctcctgccagaagttcttgacacaaactgcgtgagcacgctcttt
tccgctattaaaatgcagcgtaagaacttaaaagagctacagcacaaggaacgtgctctt
tggcacgaatatcatactgcgttgaaattatttaatgcggtagactttgacgatttgatc
gtactgccaatccagatcttcagtgaatatcctgatatccttgcttcatataagagtcgc
tatcattacattttagtggatgaattccaagacaccagtgcacagcagtaccgtttaatg
aaaatgctcgctacacaaaatatctgtgtagtaggggacgatgatcaatcaatttattct
tggcgtggagcacaccacgacaatattctctcttttgaaaaagacttcccctacgccaca
gaaattaccttagagcaaaattaccgttccaccggaactattttggctgccgcaaatggc
gttatcgcacacaatacacaacgcaaggaaaaggcactgtggtccggtaacgattcagga
aaacctattgaaatcttcaatcccgaaacggaacgtgatgaagcaatctttattgcaaac
acgattctcgcagaacaaatacgcgcatcctattctttcagtagttttggagtcctactc
cgcacgaatagttttatgcgcataattgaagacgtatttttgcaagaaaatattccatac
cgtgtctcaggcggcatgagcttttttcagaggaaagaaataaaggatgtgctcagttat
ctgcgggtaatttctaatcctgacgacgatgtcaacctattacgcatcattaataccccg
aggcgaggaattggaaaaaaaacactgcatctagtctccgacattgctaatacacaacaa
tgttccgtgttcaatgcactgaatcaaattatcaataaaacacatgcagtcgatttaaaa
gaatcacatcgtaccgctgtggaaaattttctccagctcattacccaggcgcgtacccat
ctactttcggggaaaaatcttgcgtacaaggtacgcaaatttgttgaagacattcagtat
tttaattacctcatccaagaattccaaaaaaacgaacatgccgcacgttttaaattcttg
caaatcgaacacttagtcgaatccatcgaacactgggaacagagttcagaacacggaagc
ttgtacgactacctaaaccgcgttacgttgctagcacgcgataacgtccaaaaagaaaca
gagggcgctgtgtcgctcatgacaattcatgcgtcgaaggggctggaatttcccgtagtg
tttatcgccggcgtggaagcgggaaccattccacacgaacgaagtatagaagaggttcac
agcatcgaggaagaacgacgccttttctacgttgcaattacccgcgcaaaagagaagttg
tacctgacacactgccgcacaaggaaacgcggcggaaaaagggaagagcgcaccgcctcc
ccctttctggacgaaattcccaaacacctggtgcgcgcccatgcaccggaaggaaaaata
agcgaggaagaggtcacgcgggccttcacacgcatcaaaaaactatttacgtga

All links

Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (3)   
   PROSITE (2)   
All databases (15)

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