KEGG T.pallidum: TP0103

Treponema pallidum subsp. pallidum Nichols: TP0103

Entry

TP0103 CDS T.pallidum

Definition ATP-dependent DNA helicase, putative

Orthology K03654 ATP-dependent DNA helicase RecQ [EC:3.6.1.-]

Pathway tpa03018 RNA degradation

Class Genetic Information Processing; Folding, Sorting and Degradation;
RNA degradation [PATH:tpa03018]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: Helicase_C DEAD TraG ResIII DUF2240
PROSITE: DEAH_ATP_HELICASE HELICASE_ATP_BIND_1 HELICASE_CTER

Other DBs NCBI-GI: 15639097
NCBI-GeneID: 2610817
UniProt: O83141

Position 111788..113611

AA seq 607 aa
MGNTSDWVEMDGLRYVYAAQGAAPMPAPTDNPACDAHMSHDVIARTAQAVFGIRALFPWQ
RLVIANILDAAHACTHTTPFAAAGSSQTDATRVTHVDDAQPEDNFVGAMQDTRFDQDGVS
RAHQVVLLPTGAGKSLCFQVPALFLEGPTLVVYPLLSLMRDQCRRMQAVGFSVILLRGGL
NAQERAYMYAQLDRCAEAYGRMRGVTPPAHQTAEFSLADSISFDASLFSDDVSTFSKVVH
VDERLAQKRTESRRGVCIIASPEILTQPALRARVRACRVAHLVIDEAHCVSEWGDSFRPD
YVRLGELVQDLAPQVVTAFTATASQTVLARIMEVLFGGRAHVLQGTVDRPNIRYTVRTVL
CKQTALTQLVARCVRPAVIFCARRVQVERVAHHLRTCLSDTQIRFYHAGLQREEKETVER
WFHTHDSAVLVTTCAWGMGVDKPNVRTVIHVDAPLTVEAYVQEVGRAGRDGMRADAFLLW
SPRDARSIETLPHAQRVRAHVLRHFAESGRCRRAVLLESLGEQNVCAGCDVCAGTARFVC
EDVEALLQFLKKNARRFTVSSLVQHLALHQKVLSVADVRALLYYALETGRVKKKHSLLWG
DVLYVAR

NT seq 1824 nt +upstreamnt +downstreamnt
gtgggtaatacttcagattgggtagagatggatggattgcgctatgtgtatgccgcgcag
ggtgcggcccccatgcctgctcctacggataatcctgcttgtgatgcgcacatgtcgcat
gacgtcatagcgcgtactgcccaagcagtttttggtattcgtgcgctgtttccttggcag
cgcttggtaattgctaacatactggatgcggcgcatgcgtgtacacatacaactccgttc
gctgcggcaggttcttctcaaaccgatgctacgagggtgactcatgtggatgacgcgcag
cctgaggataatttcgtcggtgccatgcaagacacacgttttgatcaggatggcgtgtca
cgcgcacatcaagtggtgctattgccgacaggtgcaggaaaatcgctgtgttttcaagta
cctgccctctttttagaggggccgacgctagtggtgtacccactgttatcgctcatgcgt
gatcagtgccgtcggatgcaggcagtgggattttcggtcatcttgttacgtggtggactg
aatgcgcaagagcgcgcgtacatgtatgcgcagttggataggtgtgctgaggcgtatggc
cggatgcgaggcgttacgcctcctgcacaccagacggcagaattttcccttgcagattcg
atctcttttgatgcgtcactcttctctgatgacgtgagtaccttctcgaaggtggtacat
gtggatgaacgtcttgctcagaaaaggacagaaagtcgaagaggtgtatgcatcatcgca
agtccagagatactcacacaacctgcgctgcgcgcacgcgtgcgtgcatgtcgcgttgcg
catttggttattgatgaagcgcactgtgtgtccgagtggggagattcgtttcgtcctgat
tacgtgcgactaggcgaattggtgcaggatcttgcgcctcaagtggtgactgcatttacg
gcgactgcaagtcaaacagtgcttgcgcgcatcatggaagtgctgtttggcggtcgtgcg
cacgtgttgcagggaacagtagatcgcccgaacattcgatacaccgtacgcacggtgctg
tgtaagcagacggcactgactcaacttgtagcgcgttgtgtgcgccctgcagttattttt
tgtgctcgtcgggtacaggtggagcgtgtagcccaccatttgcgcacgtgtctttctgac
acacagatacgtttttatcacgcagggttgcagagggaagaaaaagaaacagtggagcga
tggtttcatacccatgattctgccgttttggtaactacttgcgcgtggggaatgggagtt
gataagccgaatgtacgtacggtcattcacgtggatgcgccactgactgtggaggcgtac
gtacaggaggttggaagagcaggacgggacggaatgcgtgcagacgcatttttattgtgg
tcacctcgagatgctcgctcgatagaaacactgccgcatgcacaacgggtgcgtgcgcac
gtgttgcgccactttgctgaaagcggacgttgtcgccgcgcagttttacttgagtctttg
ggggaacagaatgtgtgtgccggatgtgatgtgtgtgcaggcactgcacgttttgtatgt
gaggatgtagaagcgctcttacagtttttgaaaaagaatgcgcgcagattcactgtatca
tcgttggtgcagcacctcgcgctacatcagaaagtgctcagtgtggcggatgtacgtgcc
ttgctatattacgcgctcgaaacaggacgtgtgaaaaaaaaacattcactcttgtggggt
gatgtcctgtatgttgcacgttaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (5)   
   PROSITE (3)   
All databases (19)

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