KEGG T.pallidum: TP1021

Treponema pallidum subsp. pallidum Nichols: TP1021

Entry

TP1021 CDS T.pallidum

Gene name gatB

Definition aspartyl/glutamyl-tRNA amidotransferase subunit B

Orthology K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase
subunit B [EC:6.3.5.6 6.3.5.7]

Pathway tpa00970 Aminoacyl-tRNA biosynthesis
tpa01100 Metabolic pathways

Class Genetic Information Processing; Translation; Aminoacyl-tRNA
biosynthesis [PATH:tpa00970]

SSDB

Motif Pfam: GatB_N GatB_Yqey ApbA_C
PROSITE: GATB

Other DBs NCBI-GI: 15640005
NCBI-GeneID: 2610877
UniProt: O83984

Position 1113419..1114948

AA seq 509 aa
MSDLQTGTVPSIAGATDDTHAAPFFYEVIIGCEIHCQLLTKTKAFCACANRSGGMPNSRV
CPVCLGLPGALPVVSEEYVRLGVRAGLALGCTIQLWSAFDRKHYFYPDLPKGYQITQYDA
PLCTDGAVDVQGVDMPVQRRVRIERIHLEEDAGKSLHAADAYSYIDFNRCGVPLIEIVSR
PDLRSAEEAACFMQTIREILTFIEVTDGNLEEGALRCDANVNVRILYKGQEHHTPISEIK
NMNSYRMVRDACTYEVQRQLQEFWQKGPASKEEMQRKRTMGWDPVEGVTLLQRTKHSLRD
YRFMRDPDLPDLHLTPAYVQHLSYTVGELPAARRARFKLDLGLSAFAAQTLTGSRMLADW
FEKAAHASKNARRVANWILSEVLAVVNEKNICIAELNLSPEAIAELMDAVEDQRITGKQA
KDIFAQMLATGARAQDIISAQGLAQLSDEEEIATLVQTVFQEHPKALRDWQHGKTNVAAW
LMGQVMKRSRGRAHPARVATLVHQALSQL

NT seq 1530 nt +upstreamnt +downstreamnt
atgtctgacctccaaacaggcacagttccctccattgcaggcgccacagatgacacacat
gccgcaccctttttctacgaggtaattattggctgtgaaattcattgtcagcttctaaca
aagaccaaagctttctgtgcctgtgcaaatcgctcaggaggaatgccgaatagccgtgtg
tgtcctgtgtgtcttgggttgccaggagcgttgcccgttgtgagtgaagagtacgtgcgg
ctcggggtgcgcgccggacttgcgttggggtgcactatccagctttggtccgcttttgat
cgcaagcactatttttatccagatctcccaaagggttatcaaattacccagtacgacgct
cccttgtgtacggatggtgcagtggatgtacagggagttgacatgcccgtgcagcggcgt
gtccgtattgaacggatacatttggaggaggacgcaggcaaaagcctgcatgctgcagac
gcttacagctatattgatttcaatcgttgtggggtgccgctcattgaaattgtatctagg
ccggatctgcgctctgcagaggaggccgcatgttttatgcagacgatccgcgagattctc
acctttatcgaggtaacggatggtaatttagaagaaggcgcactgcgatgcgacgcgaat
gttaatgtgaggattctgtacaaagggcaagaacaccacactcccatttctgaaatcaaa
aatatgaactcgtatcgtatggtgcgggacgcgtgtacgtatgaggtacagcgtcaattg
caggagttttggcaaaagggtcctgcgagcaaagaagagatgcagagaaaacgcacgatg
ggctgggatccggtcgaaggggttacgcttttacagcgtacaaagcactcactgcgcgat
tatcgtttcatgcgcgatccagacttacctgacctgcacttgacccctgcatatgtccag
catctctcttacacagtcggggaacttccggcagcgcggcgtgcacgtttcaaacttgac
cttggcttgtcggcgtttgcagcccaaacgcttaccggcagccgcatgctcgcagactgg
tttgagaaggcagcgcatgcgtctaagaatgcgcgacgagtggcaaactggattctgtcg
gaggttcttgcggtagtaaacgagaagaatatctgcattgcagagctcaatctgagtcct
gaagcaattgccgaactaatggatgcagttgaagatcagcgcattaccggaaaacaagca
aaggatatatttgcacaaatgcttgccaccggtgcgcgagcgcaggacattatctccgca
cagggtctggcacaactttcagatgaggaagaaatcgcaacgttagtgcagacggtgttt
caagaacatccaaaggcactgcgtgattggcaacacggtaagacaaacgtggctgcctgg
ctcatggggcaagtaatgaagcgttcccgcgggcgcgcacaccctgcgcgagtggcgacg
ctcgtccaccaagcactctctcagctgtaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (3)   
   PROSITE (1)   
All databases (17)

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