KEGG   Treponema pallidum subsp. pallidum Nichols: TP_0329
Entry
TP_0329           CDS       T00016                                 
Name
(GenBank) serine hydroxymethyltransferase (glyA)
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
tpa  Treponema pallidum subsp. pallidum Nichols
Pathway
tpa00260  Glycine, serine and threonine metabolism
tpa00460  Cyanoamino acid metabolism
tpa00630  Glyoxylate and dicarboxylate metabolism
tpa00670  One carbon pool by folate
tpa00680  Methane metabolism
tpa01100  Metabolic pathways
tpa01110  Biosynthesis of secondary metabolites
tpa01120  Microbial metabolism in diverse environments
tpa01200  Carbon metabolism
tpa01230  Biosynthesis of amino acids
tpa01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:tpa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    TP_0329
  09102 Energy metabolism
   00680 Methane metabolism
    TP_0329
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    TP_0329
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    TP_0329
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    TP_0329
Enzymes [BR:tpa01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     TP_0329
SSDB
Motif
Pfam: SHMT Baculo_p26
Other DBs
NCBI-ProteinID: AAC65317
UniProt: O83349
Position
350288..352012
AA seq 574 aa
MNNSALRAYLSTRAPDQIHSAFVAYLANLDLVAHQFPQIASDIVQELIDQRSYVKLIASE
NYSSLAVQAAMANLLTDKYAEGFPHHRYYGGCQNVDSIESAAAAEACALFGAEHAYVQPH
SGADANLVAFWAILSRQIEMPTLSSLGVTAATHLSEEQWEVLRQKMGNQKLMGLDYFSGG
HLTHGYRQNVSGRMFRVVSYAVDRDTGLLDYAAIEAQAKRERPLILLAGYSAYPRSINFR
IFREIADKVGAVLMADMAHFAGLVAGGVFTGDEDPVRWSHIVTSTTHKTLRGPRGAFILC
KKEFAEAVDKGCPLVLGGPLPHVMAAKAVAFREARNAAFKTYAHAVRDNARALADACIQQ
GMQLQTGGTDNHLLLLDVRPFGLTGRQAERALIDCGVTLNRNSLPFDPNGAWLTSGLRIG
TPAVTSLGMGPEEMKRIARLIARVLGAATPVRTKTGALSKSAAEVPGEVRSSVCSEVREL
LARFTLYPELDEPFLRAHFTRRPAGQNTCRRRDLNPYGVTPTDFESVVSASFTTSARAQP
ITRGTKGTAVHVVFLREAPCLPLREPLFFSHEEF
NT seq 1725 nt   +upstreamnt  +downstreamnt
gtgaataattccgcactccgtgcgtacctgagtacgcgtgctcctgaccagatacatagt
gcttttgttgcgtatttggccaatcttgatttagttgcgcaccagtttccgcagattgct
tctgatattgtgcaggagctgatagatcagcggtcgtatgtaaagttaatcgcaagtgag
aattacagctctcttgcggtgcaagcggcgatggctaacttgttgactgataaatacgca
gaagggttcccccatcatcgctactatggcgggtgtcagaatgttgattctattgagtct
gccgccgctgcagaagcatgcgcgctctttggtgctgagcacgcatatgtccagccgcac
tccggtgcagatgcgaatcttgttgcattctgggctatcctttcgcggcaaattgaaatg
ccaaccctttcttctcttggtgtcaccgccgctacgcatctgagtgaggaacagtgggaa
gtactgcgccagaaaatgggtaatcaaaaacttatggggttagattatttttcaggcggt
cacctgacccacgggtaccgccaaaatgtttcaggacgaatgtttcgtgtggtgtcctac
gcggtggaccgagacacaggactgctcgattacgctgcaatcgaggcacaggcaaagcgg
gaaagaccacttattttacttgccggatacagcgcgtatcctcgttccattaatttccgc
atctttcgggaaattgcagacaaagtgggcgcagtactcatggctgatatggctcacttt
gctggactggttgcaggcggtgtttttacgggagacgaggatccagtgcgctggtctcat
atcgtgaccagtaccacacacaaaacgttgcgcgggccacgcggtgcctttattttgtgt
aaaaaagaatttgcagaggcggtggataagggctgtccgcttgtgctcggcggcccgctg
ccacatgtgatggcagcaaaggcggttgcgtttcgtgaagctcgaaatgctgcttttaaa
acctatgcgcacgcagtccgtgataatgcgcgtgcgctggcagatgcctgcatacaacag
gggatgcagctgcagacaggggggacggataaccatctgctattgcttgacgtgcgtccg
tttggactgacaggtcgtcaggcagagcgcgcgctgatagactgcggagtgacgctcaac
cgtaactcgctcccctttgacccaaacggcgcatggctcaccagcggactgcgcatcgga
acccccgcggtaacgagccttggaatggggcctgaggaaatgaaaagaatagcgcgcctg
atcgcgcgcgtgctcggcgctgcaacgcctgtgcggacaaagacaggtgcgctaagcaaa
tcggcggccgaggtgcccggcgaggttagaagctcagtctgctcggaagtgcgggagctg
ctcgcacgcttcacgttgtaccctgaactcgacgaacccttcttgcgcgcacactttacg
cgtcgccctgcgggacaaaacacctgccgacgaagggacttgaacccttacggggttacc
ccaacagattttgagtctgtcgtgtctgccagtttcaccacgtcggcccgcgcgcagcct
atcacacgaggaacaaaaggtacagctgttcatgtagtcttcttgcgtgaggccccgtgt
ctcccattgagggagccgttatttttctcccatgaggagttttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (42)   

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