KEGG T00649: Teth39

Thermoanaerobacter pseudethanolicus: Teth39_0475

Entry

Teth39_0475 CDS T00649

Definition

ATP dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

tpd Thermoanaerobacter pseudethanolicus

Pathway

tpd03410	Base excision repair
tpd03420	Nucleotide excision repair
tpd03430	Mismatch repair
tpd03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:tpd03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:tpd03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:tpd03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:tpd03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme RAI1

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(501606..502529)

AA seq 307 aa
MSMIEEKISPMLASSSDPFDSPEWIYEIKWDGSRTIAFLSNKTRLQDRRLVDITHQFPDL
ALLYKQIKAKEAILDGELVVLKNGKPSYKSIMSRKHQQNLVKINLLSKIMPVIFITWDIL
YLNGKSLVELPLIERKDILRKTVKENEIIKISDFIFEHGKMLFEETGKKGLEGIVAKKAD
SKYLIGKRSKLWLKSKHFIVINAVIIGYRTDKTALILGLYDEENNLINIGSCESGLSQKE
LKAFYEVAKEIKAPDNYYNFKEKNVQWLKPLLTCKVRFMEWSENMKMRAPSFIQFEYNVK
PEECRFE

NT seq 924 nt +upstreamnt +downstreamnt
atgtctatgatagaagaaaaaatatcacctatgctggcatccagcagtgacccttttgat
agccccgaatggatatatgaaatcaaatgggatggttcaaggactattgcctttctttca
aataaaacaagacttcaagatagaaggcttgttgatataacccaccagtttccggatttg
gcattactttataagcaaataaaagcaaaagaagcaatacttgacggtgaacttgtagtt
ttaaaaaacggcaagcccagttacaaaagcattatgtcgagaaagcatcaacaaaattta
gtaaaaataaatcttttaagcaagataatgcccgtaattttcataacatgggatatatta
tacttaaacggcaagtctcttgtagaattgccacttatagagagaaaagatatccttaga
aaaacagttaaagaaaatgagatcataaaaatatcagattttatatttgaacatggaaaa
atgctttttgaagagacagggaaaaaaggacttgaaggaattgttgccaaaaaagcagat
tcaaaatatttaataggaaaaaggagtaaactctggcttaagtcaaaacattttattgta
ataaatgctgttattatagggtacagaactgacaaaacagccctcatactggggctttac
gatgaggaaaataatttaataaacataggaagttgtgaatcaggcctatcccagaaggaa
ttaaaagcattctatgaagttgccaaggagataaaagccccagataattattataacttt
aaagaaaaaaatgtgcagtggttaaaacccttgctaacatgtaaagtgagatttatggaa
tggtctgaaaacatgaagatgagggcaccttcttttattcaatttgagtataacgtaaaa
ccagaagagtgcaggtttgaataa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-TPD (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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