KEGG   Treponema pedis: TPE_2122
Entry
TPE_2122          CDS       T02803                                 
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
  KO
K01929  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
Organism
tped  Treponema pedis
Pathway
tped00300  Lysine biosynthesis
tped00550  Peptidoglycan biosynthesis
tped01100  Metabolic pathways
tped01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:tped00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    TPE_2122 (murF)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    TPE_2122 (murF)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    TPE_2122 (murF)
Enzymes [BR:tped01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     TPE_2122 (murF)
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase Mur_ligase_C
Other DBs
NCBI-ProteinID: AGT44596
UniProt: S6A4N8
Position
complement(2193720..2195159)
AA seq 479 aa
MAFDSDNLNREFTLLFFDELVKSTGGSILFNFSPVNGFTSVVIDSRGVRPNSLFVPLRGE
KQDGHIYIEDALKNGAVCFFADTEYVRLEENKITLEKLCKKYYACCITVKNNLYALQAAS
KFYLTKFPGLYKIGVTGSSGKTTTKEILASIYSLKYNTAVNKGNLNSETGLPLSIFTVRP
EHEVGIFELGMNRKGEIAELANILLPNAAIITNIGSAHIGILGTKKAIAEEKKEIFSNFT
DNCTGFVPDCKFTEFLKSVPAGKIYVYSADKNSNIKKIEENGTEGSVIFYKDEKILFPLA
GKYNIDNAAACIALAEKDNFSASEIKKGLEAVRPLFGRSQIIRGLATCFFDCYNANPDSM
SEAIDFCNSVKSEGIKHYVLASMRELGKESEASHKLIAEKVLSSEADIIYFFGDEFAFVL
KNCDKKNKRVFIFKTDEFENLKNALKENLNKGDFVLLKGSRGLELERLEEVLKPEAGNE
NT seq 1440 nt   +upstreamnt  +downstreamnt
atggcttttgattcggataatttaaatcgtgagtttactcttttattttttgatgagctt
gtaaaaagtaccggcggaagtattttgtttaatttttcgccggtaaacggttttacctcc
gttgtaatcgacagtagaggtgtaaggcccaattctctttttgttcctttacgcggagaa
aaacaggacggtcatatttacattgaagacgctttaaaaaacggtgccgtttgttttttt
gccgataccgaatatgtaaggcttgaagaaaataagattacgcttgagaaattgtgtaaa
aaatattacgcctgctgtattacggtaaaaaacaatttatatgctcttcaggcggcatca
aaattttatttaacgaaattcccgggtctttataaaataggtgtaaccggttcaagcgga
aaaactactacgaaagaaattttagcttcgatttattctttaaaatataataccgcagta
aataagggtaatttaaattcggaaacggggttacccctttcgatttttacggtacgtccg
gagcacgaagtcggaattttcgagctcggtatgaatagaaaaggtgagattgcagagctt
gcaaatattcttttaccaaacgctgcgattattacaaacataggttccgcccatatcggt
attctcggcacgaaaaaggcaattgctgaggaaaaaaaggaaattttttcaaattttacg
gataattgcacaggctttgttcccgattgtaagtttacggaatttttaaaaagcgttccc
gccggaaagatttatgtttattccgcggataaaaattccaatataaaaaaaatagaagag
aacggaacggaaggctccgttatattttacaaagacgaaaaaattttattcccgcttgcg
ggaaaatacaatatagacaatgctgcggcgtgtatcgctttggcggaaaaagataatttt
tccgcaagtgaaattaaaaaagggttggaagccgtgcggcctctgttcggtagatctcag
attatccgcgggcttgcgacctgtttttttgattgttataatgcaaatcccgattctatg
agcgaggcgattgatttttgcaattcggtaaaatccgaagggattaagcattatgtttta
gcctcaatgcgtgaattgggtaaagaatcggaggcaagtcataagctgattgccgaaaaa
gtcttatcttcggaagcggatataatttattttttcggagatgaatttgctttcgtatta
aaaaactgcgataaaaaaaataaaagagtgtttatatttaaaacggacgaatttgaaaat
ttaaaaaatgcgcttaaagagaatttaaataaaggcgattttgttttattaaaaggttcg
aggggtttggagcttgagagattggaagaggtgttaaaaccggaggcggggaatgaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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