KEGG   Tetrapisispora phaffii: TPHA_0A03260
Entry
TPHA_0A03260      CDS       T02235                                 
Symbol
TPHA0A03260
Name
(RefSeq) hypothetical protein
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    TPHA_0A03260 (TPHA0A03260)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpf03019]
    TPHA_0A03260 (TPHA0A03260)
   03009 Ribosome biogenesis [BR:tpf03009]
    TPHA_0A03260 (TPHA0A03260)
   04131 Membrane trafficking [BR:tpf04131]
    TPHA_0A03260 (TPHA0A03260)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tpf04147]
    TPHA_0A03260 (TPHA0A03260)
Messenger RNA biogenesis [BR:tpf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     TPHA_0A03260 (TPHA0A03260)
Ribosome biogenesis [BR:tpf03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    TPHA_0A03260 (TPHA0A03260)
Membrane trafficking [BR:tpf04131]
 SNARE
  SNARE associated proteins
   Others
    TPHA_0A03260 (TPHA0A03260)
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    TPHA_0A03260 (TPHA0A03260)
Exosome [BR:tpf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   TPHA_0A03260 (TPHA0A03260)
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 AAA_5 AAA_2 AAA_33 TIP49 AAA_22 CDC48_2 AAA_14 RNA_helicase nSTAND3 Mg_chelatase AAA_17 AAA_28 ATPase AAA_25 Parvo_NS1 AAA_7 IstB_IS21 AAA_24 AAA_18 Vps4_C Sigma54_activat AAA_3 DUF815 Bac_DnaA ResIII PhoH SLFN-g3_helicase ABC_tran KAP_NTPase UFD1 Molydop_binding
Other DBs
NCBI-GeneID: 11532525
NCBI-ProteinID: XP_003683837
UniProt: G8BNC5
Position
1:complement(718294..720774)
AA seq 826 aa
MGEEKKALLDASGAEHQDEDRTATAILRSKKKDNALLVDDAVNDDNSVIAINSNTMDKLE
LFRGDTVLVKGKKRKDTVLIVLIDDDLEDGMCRVNRIVRNNLRIRLGDLITVHPCPDIKY
ATRISVLPIADTIEGITGNLFDVFLKPYFVEAYRPVRKGDHFVVRGGMRQVEFKVVDVEP
DEFAVVAQDTVIHWEGEPINREDEENNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLF
KAVGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAF
EEAEKNAPAIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRP
NSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLSDDVDLETLAAETHGYVGAD
IASLCSEGAMQQIREKMDLIDLDEDEIDAEVLDSLGVTMDNFRFALGNSNPSALRETVVE
SVNVTWDDIGGLDEIKRELRETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKA
VATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGNSQ
DNVGDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDEVGR
LSILEAQLRKSPLEPGLDLRAIAKASQGFSGADLSYIAQRAAKFAIKDSIEAHKLAESKK
VKSEEDVEMSDVKQEAEVEEVDPVPFITKEHFAEAMKTAKRSVSDAELRRYEAYSQQMKA
SRGQFSNFNFGDSTLGANSDANNGTTGASGADFASGAAEEDDDLYS
NT seq 2481 nt   +upstreamnt  +downstreamnt
atgggagaagaaaaaaaagcgttattagatgcttctggtgctgagcatcaagatgaagat
agaactgctactgctattttgagatccaagaagaaagataatgctttgttagttgatgat
gctgtcaatgatgacaattctgttattgctattaattccaatactatggataagctagaa
ttatttagaggtgacactgtcttggttaaaggtaagaagagaaaagatactgttttgatc
gttttgatcgatgatgatttggaagatggtatgtgtagagttaatcgtattgttagaaac
aatttgagaatcaggttaggtgatctgataacagtccatccatgtccagatatcaaatac
gctaccagaatttctgttctaccaattgctgatactattgaaggtattactggtaattta
tttgatgttttcttaaagccatatttcgttgaagcctacagaccagttagaaaaggtgac
catttcgttgtaagaggtggtatgagacaagttgaatttaaagtcgttgatgtcgaacct
gatgagtttgccgttgttgcacaagataccgttattcactgggaaggtgaaccaattaat
agggaagatgaagaaaataatatgaatgaagttggttatgatgacattggtggttgtaga
aaacaaatggctcaaattagagaaatggttgaattaccattaagacatccacaattattc
aaagctgtcggtattaaaccaccaagaggtgttcttatgtatggtcctccaggtaccggt
aaaactctgatggctagagctgtcgctaacgaaaccggtgctttctttttcttgatcaac
ggtccagaagttatgtcaaaaatggcaggtgaatctgaatctaacttaagaaaagctttt
gaagaagccgaaaaaaatgcccctgctattatctttattgatgaaatcgattccattgct
ccaaaaagagacaagacaaacggtgaagttgaaagaagagtcgtttcacaattattaact
ttaatggatggtatgaaagcaagatctaatgttgtcgttattgctgccactaatagacca
aactctattgatcctgccttaagaagatttggtagattcgatcgtgaagttgatattggt
attccagatgccaccggtagattagaagtcttacgcattcatactaagaacatgaaatta
tcagatgatgttgatttagaaactttagctgcagaaactcatggttatgttggtgctgat
attgcatcattatgttccgaaggtgctatgcaacaaattcgtgaaaaaatggacttgatt
gatttagatgaagacgaaatagatgctgaagttttggattctcttggtgtaactatggat
aacttcagatttgccttaggtaactccaacccatctgccttacgtgaaactgttgtcgaa
agtgtcaatgttacttgggatgatattggtggtttagatgaaattaagagagaattaaga
gaaactgttgaataccctgtcttacatccagaccaatatactaaattcggtctatctcca
tctaaaggtgttttgttttatggtccaccaggtactggtaaaactttactggctaaagct
gtcgcaactgaagtttctgctaactttatttcagtcaaaggtccggaattattaagtatg
tggtatggtgaatccgaatctaatattcgtgatatttttgacaaagctagagctgctgca
ccaactgttgttttcttagatgaattggattctattgctaaggctagaggtaattctcaa
gacaacgtcggtgatagagttgttaaccaattattaactgaaatggatggtatgaatgca
aagaaaaacgttttcgttattggtgcaacaaatagaccagatcaaatcgatccagctatt
ctaagaccaggtagattagatcaattgatttacgttccactacctgatgaagttggtaga
ttatctattttagaagctcaattaagaaaatctccattagaacctggtttagacttacgt
gctattgctaaagcttcacaaggtttctctggtgctgatttatcatacattgcccaaaga
gctgctaaatttgctatcaaagattctatcgaagctcacaaacttgctgaaagcaaaaaa
gtgaaatccgaagaagatgttgaaatgtccgatgtcaaacaagaagctgaagttgaagaa
gtcgacccagttccatttatcacaaaagaacattttgctgaagctatgaaaacagccaaa
cgttctgtctccgatgccgaattacgtcgttatgaagcatattcacaacaaatgaaggcc
tctagaggtcaatttagtaatttcaactttggtgactcaactttaggtgcaaacagtgat
gctaataatggcaccactggcgcttctggtgctgattttgcttctggtgctgccgaagaa
gatgatgacttatacagttag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (36)   
   Pfam (36)   
All databases (50)   

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