KEGG   Tetrapisispora phaffii: TPHA_0J01510
Entry
TPHA_0J01510      CDS       T02235                                 
Symbol
TPHA0J01510
Name
(RefSeq) hypothetical protein
  KO
K12815  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:3.6.4.13]
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TPHA_0J01510 (TPHA0J01510)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tpf03041]
    TPHA_0J01510 (TPHA0J01510)
Spliceosome [BR:tpf03041]
 Complex C
  Other components
   Step II factors
    TPHA_0J01510 (TPHA0J01510)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C DEAD HA2_N AAA_22 nSTAND3 AAA_19 T2SSE ABC_tran PhoH SRP54
Other DBs
NCBI-GeneID: 11533037
NCBI-ProteinID: XP_003687406
UniProt: G8BYN0
Position
10:345697..349164
AA seq 1155 aa
MMVDNKDSTVDELIQLVQGRTTSHVTANFIYTLKRLAVNNKDNLDKFLSSCNSLGNFKDE
GEFLKQLHGKLIKMHEDPSVISAKITGLVSSYNSESESESESGSDSGSQTITQHIQQLDT
ENQKSLGPSSTLRNKKLGILRSNIYESEDEDEHEDAGNDNMTLLNRHLQMKSEDPNKKII
FKKIEKSKAMKLNEYADSKVVKQSKHRLSGKDNFDLRNNISIPHTESFMSNVNNKQNIDE
SDNEFLVIDDLRNKDDNLEDEREWYNHDDDYGNAVGADNILGTEKFIPENIRTGSLNYRT
DNNNLNSEIQLLPLPIEKRKELLPSFIKQYETSSSASEKLISTSLLENDTDILINPFRNP
ESEFSINAKKGSFLVAQRRKLENEAKKNRKSANIAGTSLGEVIGIKDTQPDANRKNVKDK
ENISSAAEVEMTEDIEKTRKSLPVYKTRPDLLRLIRENQVVIIIGETGSGKTTQLAQYLF
EDGYCSTNRMIGCTQPRRVAAMSVAKRVAVERGVNLGDEVGYSIRFEDKTSAKTKIKFLT
DGILLREFLLDNDLERYSAIIIDEAHERSLNTDIIMGLFKNILSKRRDLKLIITSATLNA
TKFSDFFGNAPKFKIPGRTFPVELIYSKHAVSDYVQAAVLQAVKTHMFTKLDSGDILIFM
TGQEDIEATSYFIKEKLKEVYAKKYNNQEMDEFDDLEIFPIYSALPADVQSKIFKNLHGK
KRKIVIATNIAETSLTIDGIRYVIDCGYSKLKVFNAKLGLDSLSIVPIALSNASQRSGRA
GRTQPGVAYRLYTEESASEDMYPQAIPEIQRTNLSNTILMLKSAGINNVLNFPFIDKPPL
QTLLSSLYDLWFIGALDNYGNITSLGSAMAKFPILPSLSKMLLTAITYGCSAEILTIVSL
LSVSQIFQRPKEQQEESDKARTRFFVPESDHLTLLNVFSQWKSNKFSHKWCNKNFVNYRS
LVRALDIRTQLIQVMKRNSFKITSVGKDWDIIRKCICSGYTHQSAKISGLGKYTHLKTGI
DLLLHPTSALFGLADLPPYVVYHELLVTSQEYICCVTAVDPFWLMQYGLVMYNIKRIKES
TYDSNGFYAHTNDNEDFDDLDIKIKEIKHQQNLEFEKIQNNKIINIPGNKQNTIPRKQNI
QDQKVNIGFKRRRPL
NT seq 3468 nt   +upstreamnt  +downstreamnt
atgatggttgacaacaaggactctacggtagatgagctaatccaacttgtgcaaggaagg
actacatctcatgttactgctaactttatatatactttgaagagactagctgtgaacaat
aaagacaatttggataagtttttgtcaagctgtaattctttggggaacttcaaagatgaa
ggtgaatttttgaaacagttgcatggaaagttgattaagatgcatgaagatccatctgtt
atctctgcaaaaatcacagggcttgtatcatcgtataattctgaatctgaatctgaatct
gaatctggatcagattccggatcacaaactattacgcaacatatccaacaactcgatact
gaaaaccagaaaagcttagggccatcttctactttaaggaataaaaagttaggtatttta
cgaagtaatatttatgaaagtgaagatgaagacgagcatgaagatgctggtaacgataat
atgacattgctcaataggcatttgcaaatgaaaagtgaagatccaaacaaaaagataatc
ttcaaaaagatagaaaagagtaaagccatgaaattgaatgagtatgctgattcaaaagtt
gtgaagcagtctaaacatcgattgtcaggtaaggataatttcgacttaagaaataatatc
tcaataccacatacggaaagttttatgtctaatgtgaataacaaacaaaacattgatgaa
agcgataatgaatttttagtaattgatgatttgagaaataaggatgataatttagaagat
gaacgcgaatggtataatcacgatgatgattatggaaatgcagttggagctgacaacata
ttaggtactgagaagtttattccggaaaatatcagaacgggatccttaaattatagaact
gacaataacaatttgaactcagagatacaactattgcctttaccaatagaaaaacgaaaa
gaattattaccgtcgtttattaaacagtacgagacgtcttccagtgcatcagaaaagtta
atttcaacttccttattggaaaacgacactgatattcttatcaatccatttagaaaccca
gagagtgaattctccatcaatgcaaagaaaggtagttttctggtagctcagaggaggaag
ttagagaatgaagcaaagaagaatagaaagtcggcaaatatcgctggtacctctttgggt
gaagttattggcatcaaagatactcaaccagatgctaataggaaaaatgtgaaagataag
gaaaatattagctcagctgcagaagttgaaatgacagaagatatagaaaagactagaaaa
tcactacctgtatataaaacgaggccagaccttctaagattgattagagaaaatcaagtc
gtaattataattggtgaaactggctctggtaaaactacacaactggctcagtatttattc
gaggatggatattgctcaaccaacaggatgatcggatgtacgcagccaagaagagtagct
gcaatgtctgtggccaaaagagtagctgttgaaagaggcgttaatttaggcgatgaagta
ggttattcgatcagatttgaagacaaaacatcggcaaagactaaaattaaatttctaact
gatggtatattactaagagaatttcttttagataacgacctagaaagatacagtgctata
attattgatgaagcccacgaacgttcattaaatacagatataataatgggtttattcaag
aatattctttcgaagcgaagagatcttaaattaataattacgtcagctacattaaatgcc
acaaaattttctgatttctttgggaatgctcccaaattcaaaatacctggtagaactttt
ccagttgaattaatatactcaaaacatgcagtatctgattacgtgcaggcagcagtttta
caagctgttaaaacccatatgtttacaaaactggatagcggtgatatattaatatttatg
acaggtcaagaagatatcgaggctacttcttattttataaaagaaaagttaaaagaagta
tatgcaaaaaaatataacaaccaagagatggatgaatttgatgacttagagatatttcca
atttactctgctctaccagctgatgttcaaagcaaaatttttaagaatttacatgggaaa
aagagaaagatagttattgcaactaatattgcggaaacatctttgactatagatggaata
aggtatgtcatagattgtggttactcaaaattgaaagtatttaacgctaagcttgggtta
gatagtctatccatagtaccaattgccttatcaaacgcctctcaaagatccggcagagct
ggccgtacacaacctggtgttgcttatcgtttatacacagaggaatccgcgagtgaggat
atgtatcctcaggctataccagaaatacagcgaaccaatctttcaaatacaatattaatg
ttgaaatcagcaggtatcaacaatgtattgaattttccatttatcgataagcctccttta
cagaccttactatcatcattatatgatttatggtttattggtgcattggacaattatggt
aatataacgtctctagggagtgcgatggcaaaatttccaattcttccttctttatcaaag
atgctattaactgctataacgtatgggtgctcagcagagatacttacaattgtttcttta
ctttctgtttcacagatatttcagagaccaaaggaacaacaagaagaatcagataaagca
aggacaaggttttttgttccagaatctgatcacttaacccttttaaatgtattttcacaa
tggaaaagtaacaaattttcacataaatggtgtaacaaaaattttgttaattacagatca
ttagtgagagctttagatattaggactcagttaattcaagtcatgaaaagaaatagtttt
aaaattacatcagttgggaaagattgggatatcataaggaaatgtatctgttctggatat
acacatcaatctgccaaaatttcaggtcttgggaagtatacacatctaaaaaccggtata
gatcttctgttacaccctacgagtgcattatttggattggctgatttgccaccttatgtt
gtttatcacgaattattagtaacttcacaggaatatatttgttgtgttactgctgtagat
ccattttggttgatgcaatatggtctagtaatgtataatatcaaaaggatcaaagaatcg
acatatgattcaaatgggttttatgcacatactaatgataatgaagactttgatgatttg
gatataaagataaaggaaataaaacatcaacaaaatttagaattcgagaagatacaaaat
aataagataataaacattccaggaaataaacaaaacacaatacctaggaaacaaaatatc
caagaccaaaaagttaatataggctttaaaaggagacgaccattatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (24)   

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