KEGG   Tetrapisispora phaffii: TPHA_0K00300
Entry
TPHA_0K00300      CDS       T02235                                 
Symbol
TPHA0K00300
Name
(RefSeq) hypothetical protein
  KO
K14315  nucleoporin NDC1
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    TPHA_0K00300 (TPHA0K00300)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpf03019]
    TPHA_0K00300 (TPHA0K00300)
Messenger RNA biogenesis [BR:tpf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     TPHA_0K00300 (TPHA0K00300)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 11533371
NCBI-ProteinID: XP_003687598
UniProt: G8BZ36
Position
11:59882..61705
AA seq 607 aa
MPVPLSHKYKYTSLFSDICRSRFNHLVTRFIPIIGLLFTLTISILFGSGYPSYFRRIISS
LLYKFPILYLLSLLLVFMRKNYLHVNYDVPSNIITSVFRRLFSIKAIAYLLSNILVIKLF
AVFFQDLLSISLNHILLTIILPATYTIQHVLFDLDRLPFKFEIQHQPPSEYIYKKLKAIV
IKSLILAITIMTVILFGFATLIGKWTLGFYGYVSYFVFTFVTLLYIEFINLSFTAHMIIG
CIHKGKLISSLSATPVETLISGLSSNKSFTKMTAFQELCYRAISMDSSLRTPIYQARLRN
NKIWPAILNECIILTKSNNTAVSQYMLTLQNSLKPASTFKQSSTRDFLTKSSNDEIFGND
KSIRSDGQFDSNGFLFNNNFEANAKISNNQGHPNRIAVRTGDILINNKRDHQTNLNSNKL
FNNTHLFDEPIITHKTKFMLAVQKIWSIYSVQIKKFFTKSQENSESQTLSILETLNISKI
RIAERLVPMPVTQGYCIIALMGLFIHALDEDPKGSIVSSVGDVLKLLERSVGSLGRYADW
KPDYTSNLKNDTKKIKTLDNVSKLYELSINVFLEVVLKYNVLLNDVYLDKDVIILSKWVL
EMCNDEI
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgccggtgccgttgagccataaatataaatacacttctctatttagtgatatatgcagg
agtagattcaaccatttagtgacaagatttattcccattattggtttattgtttacacta
acaatttcaattttgtttggatctggatatccttcatattttagaagaataatatcctcg
ttactgtataagtttccaatcttatatctattatcattattgcttgtattcatgagaaag
aattacttacatgttaattacgatgttccttcaaatattataaccagtgtatttcgcaga
ctgttctctattaaagcaatagcgtatttactttcaaatatcttggttataaagttattt
gcagtgtttttccaagatttattaagcatttccctaaatcatattcttttaactattata
ttgccagctacatacacaatacaacatgttttatttgatttggatagacttccattcaaa
tttgaaattcaacaccaacctcctagtgaatatatttacaaaaaattaaaagcaattgta
atcaagtcattaatccttgcaattacaatcatgaccgtcatattatttggtttcgcaact
ttaattggaaaatggacattaggcttttatggttatgtctcatacttcgttttcacattt
gtaactctactttacattgaatttattaatttatccttcacagcgcatatgattattgga
tgtattcataaaggtaaattgatatcatcattgtccgcaacaccagttgaaacattaata
agtggattaagctctaataaaagttttacaaaaatgacagcattccaagaattatgttat
agagcgatttccatggattcgtctttgcgaaccccaatatatcaagcacgtttaagaaat
aataaaatatggccggctattctaaatgaatgtattattttaacaaaatctaataataca
gctgtttcccaatatatgcttactttacagaacagcttaaaaccagcatctacattcaaa
caatcaagcaccagagattttctaaccaaatcctccaatgatgaaatttttggtaatgat
aaatcaataagatctgatggacaatttgatagcaatggattcttatttaataacaatttt
gaagctaatgcaaaaatatctaacaaccaaggacatccaaatagaattgcagtgcgaacc
ggagatattttgattaacaataagcgtgatcatcagactaatttgaatagtaacaaactg
ttcaataacacgcacttatttgatgaaccgattattacccataaaactaaatttatgttg
gcagttcagaaaatttggtcaatatacagtgttcaaattaaaaaattctttaccaagtct
caagagaatagcgaatctcaaacgttatcaatacttgaaactttgaatatctcaaaaata
agaatagctgaaagattagtaccaatgccagtaactcaaggatattgtattattgctctt
atgggtttattcattcacgctttggatgaagatccaaaaggtagcattgtatcatcagtt
ggtgatgttttaaaattattagaaagatctgtcggttctttagggaggtatgctgattgg
aaacctgactatactagtaacctcaaaaatgatacgaagaaaatcaaaacgctagataat
gtatctaaactatatgagctatctattaatgtctttttagaggttgtattaaagtacaac
gttttactaaatgatgtttaccttgataaagatgtcattatattaagtaaatgggtattg
gaaatgtgtaatgacgaaatatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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