KEGG   Treponema putidum: JO40_01565
Entry
JO40_01565        CDS       T03278                                 
Name
(GenBank) DNA polymerase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
tpk  Treponema putidum
Pathway
tpk03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tpk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    JO40_01565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpk03400]
    JO40_01565
Enzymes [BR:tpk01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     JO40_01565
DNA repair and recombination proteins [BR:tpk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     JO40_01565
SSDB
Motif
Pfam: UDG Uma2
Other DBs
NCBI-ProteinID: AIN92968
Position
344027..344842
AA seq 271 aa
MVCTDESRRKKILYTFFRTASDYLSGFKTDEEYPDFADTVLPETTLSESAISETAFSKPE
GAAGLTISSSDAKSGFESLEKVYAQIASCKACRLCERRHNTVAGEGPCEFSNFGNKIEVM
VIGEGPGADEDAQGRPFVGKAGQLLDKMLAAIELYRTHNCYITNVVKCRPPNNRDPLPDE
TAACRDFLNAQIALIRPKAILVVGRVALQNLLETQEGIGKMHGKFFEYQNIPLMATYHPS
ALLRDVNLKRPAWEDLKLFRSRLNELPQQID
NT seq 816 nt   +upstreamnt  +downstreamnt
atagtttgtaccgatgaaagccgaagaaaaaaaatattatacacgtttttccgcacagca
tccgattatttatccggatttaaaacggatgaagaatatcccgattttgccgatactgtt
ctcccggagacgactctttccgagtcggctatctccgagacggctttctccaagccggaa
ggagcggccggcttaacaatttcttcaagcgatgcaaaaagcggttttgagagccttgaa
aaggtctatgctcaaattgcttcctgtaaggcctgccggctatgcgaaagacgacacaat
acggttgcaggcgaagggccttgcgagttttccaatttcggtaacaagatagaagtaatg
gtcataggcgaggggccgggtgccgatgaggatgctcaaggccgtccctttgtcggcaag
gccggacagcttttagataaaatgctcgccgccatcgaattataccgcacccataattgc
tatatcacaaatgtggtaaaatgcaggccgcccaataaccgcgaccctctgcccgatgaa
actgctgcgtgcagagactttttaaatgctcaaattgccttgataaggcctaaggcgatt
cttgtagtcgggcgagtagctcttcaaaacctcttggaaactcaagaaggcataggcaag
atgcacggcaagttttttgaataccaaaacattccgctgatggcgacctatcaccccagt
gcccttttgagagatgtcaatctaaaacgccctgcatgggaagacttaaaactcttccgt
tcccgcctcaacgaattgcctcaacaaattgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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