KEGG   Treponema paraluiscuniculi Cuniculi A: TPCCA_1028
Entry
TPCCA_1028        CDS       T01555                                 
Symbol
uvrD
Name
(GenBank) excision endonuclease subunit UvrD
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
tpl  Treponema paraluiscuniculi Cuniculi A
Pathway
tpl03420  Nucleotide excision repair
tpl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tpl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    TPCCA_1028 (uvrD)
   03430 Mismatch repair
    TPCCA_1028 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpl03400]
    TPCCA_1028 (uvrD)
Enzymes [BR:tpl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     TPCCA_1028 (uvrD)
DNA repair and recombination proteins [BR:tpl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     TPCCA_1028 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     TPCCA_1028 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 HXXSHH AAA_11 AAA_12 AAA_16
Other DBs
NCBI-ProteinID: AEH40955
UniProt: F7XRJ4
Position
complement(1116350..1118362)
AA seq 670 aa
MESYLSALNEAQRQAVCHYGSPLLILAGAGSGKTRVITTKIAHLIRSRQVRPEQILAVTF
TNKAAREMRTRACALESAAQGATICTFHALGVWILRRYAVRLGLNPHFSIYDDHDVRALL
PKILPNCDHSRAGMLARGISQAKDYGLDCTSFESVHTRVSDPACAARAVLGDRQFAHAYA
CYHRRMREMGTVDFGDLIMLPVQLLREHQDVAEQLHARWQVVMIDEYQDSNVAQFHFLQV
LTGAHTYLCVVGDDDQSIYRFRGAEVKNILTFPEFFQNTQIIRLEYNYRSTDAILRVADS
VVKKNQDRLGKALIAQRTGGTKPRLFLLNNQDEEAALCVHLIQEARARGIPYADWAILYR
VNAQSLSFEQCFLRNRIPYRIVGTLKFYSRAEVKDMLAFLQLIVNGSDELALRRVLNKPP
RGIGEKTQDALFVCARQAAITDFTTLQSTHLTALGTRARQKVSSFLSLLRALRARMPQAP
AAGEEARTSAPPEEPVEERTHDAEGLARFVSVVMEHTGLEEWYRQKDEEEGTQCAVNVQE
LMNAASLYACSHEGLVSFLEHIQLDQNMADEGGAADAVHLITIHNTKGLEFRRVILTGLE
NGVFPRDDEADIQEERRLMYVACTRAMDSLYLTACAYRRMWGRHTAMKPSRFLTELDSAL
LEITDPRHFA
NT seq 2013 nt   +upstreamnt  +downstreamnt
gtggaatcctacctgagcgcgctcaatgaggcgcagcgtcaggccgtttgccattatggc
agtccgcttcttatccttgccggcgcaggctcaggaaagacgcgcgttatcaccactaaa
atcgcccatcttatccgttcccggcaggttcgccccgagcagattctggcagtaaccttt
accaataaagcggcgcgtgagatgcgcacgcgtgcctgcgcgcttgagtctgccgcgcag
ggggcaactatctgtaccttccacgcactgggggtgtggatcctgcgtcgctatgcagtc
cgtctgggattgaacccccattttagtatttatgacgaccatgacgtccgtgcactcttg
ccaaaaatcctgcctaattgcgatcacagtcgggcaggcatgctcgcgcgtggaatttct
caggcaaaggactatgggctcgactgcacctcgtttgagtcagtgcacacgcgtgtctcc
gatcctgcatgcgctgccagagccgttctgggtgacaggcagtttgcgcacgcatatgcg
tgctaccatcggcgtatgcgcgaaatgggaacggtagactttggggatctgattatgctt
ccggtgcagctcttgcgtgagcaccaggacgtcgccgaacagctgcatgcacggtggcag
gtggtcatgatagatgagtatcaagactcaaacgtggcgcagtttcatttcttgcaggtg
ctcaccggtgcgcacacctatctttgtgtggtaggggacgatgatcagtccatctaccgc
tttcgcggagcagaggtaaaaaatatcttgaccttccctgagttctttcaaaacacccag
attatccgcttggagtacaactaccggtccacagacgcaattttgcgtgttgccgattcg
gtagtgaaaaaaaaccaagaccgcttgggaaaggcgctgattgcccagcgcacgggaggt
actaagccgcgcctgttcttgctgaataatcaagatgaagaagctgcgctgtgcgtgcac
ctcattcaagaagcgcgtgcgcgcggcatcccatacgcggattgggcgattttatatcgg
gtaaatgcacagtcgctgagttttgaacagtgttttttgcggaatcgcattccgtatcgc
attgtcggcacgctcaaattctacagtcgcgcagaggtaaaagacatgctggcgtttctc
cagctcatagtcaatggctcagatgaactggccctccggcgggtgctgaataagccgcct
cggggcattggagaaaagacacaagacgcattgtttgtctgtgcacggcaggcagccata
actgattttaccacactccagtccacccacctgaccgcgcttggcacgcgtgcgcggcaa
aaggtcagtagctttctgtcactgttacgtgcgctgcgtgcacgcatgccacaggccccc
gcagcgggagaagaagctcgcaccagtgcgccgcctgaggagccggtagaggagcgcacc
cacgatgcagaaggacttgcgcgctttgtttctgtggtaatggaacacacggggctggaa
gaatggtatcgacagaaggatgaggaagaagggacgcagtgcgcggtcaacgtgcaggag
ttaatgaacgcagcgtcactgtatgcatgttcgcatgaggggttagtgagtttcctagaa
cacatccaattggaccaaaatatggccgacgagggaggagcggccgacgcagtgcacttg
atcaccattcacaatacaaaaggactggagtttcgacgggtgattctgaccggactagag
aacggggtgtttccgcgtgatgacgaagcagatatacaggaagagcggcgtttgatgtac
gttgcctgcacgcgggctatggatagcttataccttaccgcgtgtgcgtaccgcagaatg
tggggacgacacacggcgatgaagcccagccgctttttgactgagcttgactccgcgctg
ttagaaataaccgatccgcgacactttgcctaa

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