KEGG   Candidatus Tremblaya princeps PCIT: TPPCIT_044
Entry
TPPCIT_044        CDS       T01563                                 
Symbol
dnaE
Name
(GenBank) putative DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
tpn  Candidatus Tremblaya princeps PCIT
Pathway
tpn03030  DNA replication
Brite
KEGG Orthology (KO) [BR:tpn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TPPCIT_044 (dnaE)
   03430 Mismatch repair
    TPPCIT_044 (dnaE)
   03440 Homologous recombination
    TPPCIT_044 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpn03032]
    TPPCIT_044 (dnaE)
   03400 DNA repair and recombination proteins [BR:tpn03400]
    TPPCIT_044 (dnaE)
Enzymes [BR:tpn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TPPCIT_044 (dnaE)
DNA replication proteins [BR:tpn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     TPPCIT_044 (dnaE)
DNA repair and recombination proteins [BR:tpn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     TPPCIT_044 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6
Other DBs
NCBI-ProteinID: AEI75113
UniProt: F7XYD7
Position
39014..42259
AA seq 1081 aa
MTEGCSTAPLGCSCGVDFVHLRLHSEFSMHDGMVRVEDAVRAARADMQSALALTDLNNVC
GAVKFYRAAVRSGVKPIVGCNLLLRGAFGETSSVLALARSGGGYRNMCRILTAAWGDAAT
CVEARVDMRWLAGSPRILKGIVVLSGALEGQIGRHIIAGNYSAARRSVDDWLTLTQGSFY
LELQRCGHSGTEAYVHRALELSLYARVPVVATHPIQFMAPSDYPLHCVRCGMAAGALGAR
ATGIFTREQHFKSRESMSRIFLDIPSAIANTCAIARMCNLHMDIGRLRRPVFAGCSPCNE
ASALACTLGTGMRSRMMDGRMPRCTGQRREYAARIREEYRIVAGMGFCGYFLIVADFVGW
ARARGIPVGSGRGSGAGSIMAYMLGITDIDPIEHGLLFERFLNPERVTMPDIDIDFCQEG
RDRVVQYVRRRYGSVAQITTFGTMAARAAVREAARAMGVSYTLADSIARLVPIRPGARVT
IPNSLKEVRMLRSRYASEGDVRLLIDTASRMEGLVRNMAVHAGGVIIAPADIQDLCPLYQ
QAGSIVPVSQLDKDDAESLGLVKFDFLGLTTLTILSCAARGVVGTGRAVSPHSLCGQPCD
SAAFGLLQAADTVAVFQLEGLGMQEALRTTMPDRLGDIIALISLYRPGPMHLVRSYCRRK
HGVEAAGVVDARLQPILGETYGVMVYQEQVMRIAQTMGGYTPGEADLLRRVMSRKQPRDM
AEHRISFVNGAARLGIGRSSALAVFDHMEKFASYGFNKSHAAAYATMSYQTAWVKARHPV
EFMAANMSWSLGGDDRLRQLRLDCARRGVPLRAPDVNRPSYRFTPITCDRIEGHAYIVYG
LGAVKCGGEAVVRDIARCREDRPFRSMYDFLARINSRIVKRGAVECLIKAGAFDCAHGGA
RATMLEALPAAMLDRHEPTALLLRSPKPTSAACLSAAGAWRFAVQHEMEALGYYFSIHPF
SRCRGAARAIATMGIDAIRRRARSHATITMCGVALSMGARSGPEGHSGMVVIEDDSERCP
VYCATRYVAGPVLIRSPLVVTGRVYVSNDRERLSVTALRLGGIDTGALLYRAPVQGIYRI
P
NT seq 3246 nt   +upstreamnt  +downstreamnt
atgacggagggttgctctacagcaccgctgggctgctcttgcggcgtagactttgttcac
cttcgtctgcactctgagttctctatgcacgacggcatggtcagggtagaggacgcggtt
cgcgcggcgagggcagacatgcagagcgcgcttgcgctaacagacctaaacaacgtctgc
ggagcggttaagttctacagggctgccgtaaggtctggcgtaaagcccatagtgggatgc
aacttgctactacgcggggcgttcggcgagacttcgtccgtgctagccctggccagaagc
ggcggagggtatcgtaacatgtgcaggatactaacagcggcgtggggcgatgctgcgacg
tgcgttgaggctcgtgttgatatgcgctggcttgcaggaagcccacgcattctaaagggc
atcgttgttctttcaggggcgcttgaaggccaaatcggccgccatatcatcgccggcaac
tatagtgcagcacggcgctcagtggatgattggctcacactgacccaggggtccttctac
ctagagctgcagcgctgtgggcatagcggcactgaggcttacgtacatagagccctagag
ctatccttgtacgcaagggttccagtggttgcaacgcaccccatacagttcatggcgcca
tcagactacccgttgcattgcgttcgctgcggcatggctgctggtgcgctgggagcacgc
gctacgggtatctttaccagagagcagcacttcaagagcagggagagcatgtctaggatt
ttcctcgacataccctctgccatcgccaacacgtgcgccatagcgaggatgtgcaacctg
cacatggatattggtaggctaaggcgaccagtgtttgccggttgctccccttgcaatgag
gcatcagcgctagcatgcacgctaggcacaggcatgcgatcgcggatgatggatggtagg
atgccacgctgcacgggccagcgtcgtgagtatgctgctaggattagggaggagtacagg
atcgtcgcaggcatgggcttctgcggttacttcctcatagttgctgatttcgtgggatgg
gctagggctcgtggcatacctgtggggtctggcagggggtctggtgccggatctatcatg
gcgtacatgcttggcataacggacatagaccccatagagcacgggctgctattcgagcgt
ttccttaaccccgagcgcgttacgatgccagatatagacatcgacttctgccaggagggc
cgggacagggtcgtgcagtacgtcaggcgccgctatggcagcgtggctcagataaccaca
ttcggcactatggcagcccgtgctgctgtgcgcgaagctgcgcgggctatgggcgtaagc
tacaccttggccgacagcattgccaggctggtgcctatcaggcctggcgctagggtcacc
ataccgaacagcctcaaggaggtgcgcatgctgaggtccaggtatgcatcggagggagac
gtgaggctacttattgacacggcttccaggatggaggggctggtgaggaacatggcagtg
cacgcagggggcgtcataatagcgccagcagacatacaggacctgtgtccgctctaccag
caggctggtagcattgttcccgtaagccagctggacaaggacgatgcagagtctcttggg
ctggtgaagttcgatttcctggggcttacgacgctcaccatactgagctgcgcagcacgc
ggcgtagttggcacagggcgcgctgtaagcccgcactccctgtgcggccaaccgtgcgat
agcgcagccttcggcctcctgcaggctgctgatactgtggcggtctttcagctagagggc
cttggcatgcaggaggcgcttaggaccaccatgccagacaggctgggagacataatagcg
ctgatatcactgtacaggcctggccccatgcacctggtccgcagctactgcaggcgcaag
catggcgtcgaggcagctggcgtggttgacgcacgcctgcagcctatccttggtgagacg
tacggcgttatggtgtaccaggagcaggtaatgaggatagctcagacaatgggtggatac
accccaggggaagctgacctgctacgtcgagtgatgagcaggaagcagcccagggatatg
gcagagcatagaatatcattcgtaaacggtgctgcaaggctcggcataggaagatccagc
gctttggcggtcttcgaccacatggagaagtttgccagctacggtttcaacaagtcgcac
gccgcagcctatgccaccatgtcctaccagactgcgtgggtaaaggcacgccatccagta
gagttcatggccgcaaacatgagctggtctcttggaggcgacgacagactccggcagctg
cgcctggactgcgcgcgacgtggcgtgccactcagagcccctgacgtcaataggccttcc
tataggtttacacccataacatgcgataggatcgaagggcacgcgtacatagtgtacggg
ttaggtgcagttaagtgcggcggtgaggctgtggtgcgggacattgccaggtgcagggag
gataggccgttcagaagcatgtatgacttccttgcacgcatcaacagtaggatcgtcaag
aggggcgctgttgagtgtctgattaaggccggggcattcgactgcgctcatggtggcgct
agggcgacaatgctggaagcactgcctgccgctatgctcgatcgccacgagcctactgcg
ctgctgttgcgcagtccgaaacccaccagcgcagcttgcctgagtgctgcaggagcctgg
cgctttgctgtgcagcacgagatggaggcgctaggatactacttctcgattcacccattc
agcaggtgcagaggtgcggcaagggctattgctaccatgggcatcgatgccataaggcga
cgcgcgcgctcccatgccactatcactatgtgcggtgtagctttaagcatgggggcaagg
tctggcccagaggggcatagcggcatggttgtcatagaggacgactcagagcgatgcccc
gtatactgcgctacgcgctacgtcgcaggccctgtgttgattagaagtccgctggtcgta
actggcagggtgtacgtatctaacgatagggagaggctgagcgtgacggctctgaggctg
gggggcatcgacactggcgccctgttatatcgggcgcccgtgcagggtatctatcgcata
ccttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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