KEGG   Candidatus Tremblaya princeps PCIT: TPPCIT_147
Entry
TPPCIT_147        CDS       T01563                                 
Symbol
dnaN
Name
(GenBank) putative DNA polymerase III, beta subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
tpn  Candidatus Tremblaya princeps PCIT
Pathway
tpn03030  DNA replication
Brite
KEGG Orthology (KO) [BR:tpn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TPPCIT_147 (dnaN)
   03430 Mismatch repair
    TPPCIT_147 (dnaN)
   03440 Homologous recombination
    TPPCIT_147 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpn03032]
    TPPCIT_147 (dnaN)
   03400 DNA repair and recombination proteins [BR:tpn03400]
    TPPCIT_147 (dnaN)
Enzymes [BR:tpn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TPPCIT_147 (dnaN)
DNA replication proteins [BR:tpn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     TPPCIT_147 (dnaN)
DNA repair and recombination proteins [BR:tpn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     TPPCIT_147 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: AEI75198
UniProt: F7XYM2
Position
complement(132730..133863)
AA seq 377 aa
MDSARAFLIAPGHSLNRVLKHVLGVGLRGSLDGTCTVCVSKRGAFVYFTTNGIGMQVSMG
IDGRSPAAIEPAVVQLRLLVEVVNSVSTKSLSLVASEGYLTVFTGDACFHIRTAVPDEHC
DLAPCSRLAHVASLAVMELRAILMAACQPISGRDYSSAPPDVHLSISRGLALCASFDGSR
MSCAAAPCRDCGSNDRAAMPVDTARSIARLLGHGGLARIYRLGGVLGIAFGQTEVACRLS
DADSMDAGFVLARRYVYAFCIGRLRLESILRRATILMEDRIRDLSIQVAPGLLLVRASNT
VREKMEEVIVPAGLNYGMLGSELIVNADKVRDVLTDACPYLVSFHVGADRLSVMLAGHSA
PVSHRHVLPLVSTGFDD
NT seq 1134 nt   +upstreamnt  +downstreamnt
atggatagcgcgcgggcttttctgatagcaccagggcatagtttgaacagggtgttgaag
cacgtgcttggcgtagggctgcgtggctccttggacggaacttgcactgtttgcgtgtct
aagcgtggagcatttgtgtacttcacaaccaatggtattggcatgcaggtgagcatgggc
atcgatggccgttcacctgctgccattgagcctgcggtggttcagctgcggctgctggtt
gaggtagtcaactcagttagtacaaagtccctgtccctcgttgcaagcgagggatacctt
accgtgtttaccggagatgcgtgctttcacataaggactgcggtgccagatgagcactgc
gaccttgcgccatgctctcgccttgcgcacgttgcatctttggcagtgatggagctcagg
gcgatcctcatggctgcatgccagccaattagcggccgcgattacagcagcgcgcctccc
gatgtgcacctgtcgataagcagagggctggcgctatgcgcctcgttcgatggctctagg
atgtcatgcgctgctgcgccatgcagggactgcgggagcaacgatcgcgctgcgatgcca
gtagacaccgcgcgctcgatagctaggctgctaggacacggcggccttgcgcgcatctac
aggctgggcggcgttctgggcatcgctttcggccagacggaggttgcatgcaggctgtcc
gatgccgattcaatggatgctggcttcgtcttagcccgcaggtacgtctacgctttctgc
atcggccgccttaggctggagtccatcctgaggcgtgcaacgatactaatggaggatagg
ataagggacctcagcatacaggttgcgccagggctacttctagtcagggcgtcaaacact
gtgcgtgagaagatggaggaggtaatcgttcctgcaggactgaactacggcatgcttgga
tcggagctgattgtcaacgctgacaaggtgcgtgatgttcttaccgacgcgtgcccgtac
ctggttagctttcacgttggcgcggataggctgagcgtaatgctagctgggcactctgcc
cccgtgtcccaccgtcacgtcctgccccttgtgagcacaggcttcgacgactag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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