KEGG   Treponema pallidum subsp. pallidum Mexico A: TPAMA_1008
Entry
TPAMA_1008        CDS       T02273                                 
Symbol
nrdA
Name
(GenBank) ribonucleotide-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
tpo  Treponema pallidum subsp. pallidum Mexico A
Pathway
tpo00230  Purine metabolism
tpo00240  Pyrimidine metabolism
tpo01100  Metabolic pathways
tpo01232  Nucleotide metabolism
Module
tpo_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
tpo_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:tpo00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    TPAMA_1008 (nrdA)
   00240 Pyrimidine metabolism
    TPAMA_1008 (nrdA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpo03400]
    TPAMA_1008 (nrdA)
Enzymes [BR:tpo01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     TPAMA_1008 (nrdA)
DNA repair and recombination proteins [BR:tpo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    TPAMA_1008 (nrdA)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN ATP-cone DUF1980_C
Other DBs
NCBI-ProteinID: AFU66982
Position
complement(1100016..1102553)
AA seq 845 aa
MHIIKRNGEPQPYMREKIIVAISAAFRSVQNPLAPEVPAIITDLAAEVERQLFEMNRAGV
PVHVEKIQDFVEKTLTKYNHSDEVKSFILYRDDRTKKRIAREQIACCFTDSSVLGVLKEI
QQDFPFPEYSLDALASKFLLFKKEVTDERRSMQLLIKAAVELTAQEAPQWELIAARLLML
DFSLALGTSLEKLNIHSFYEKITYLEEAGLYGVYIRTHYSRAEIEEAATYLECSRDKLFT
YSSLDMILRRYVIRTRAHVPLETPQEMFLGIALHLAMNETQDRMQWVKRFYTVLSKLQVT
VATPTLSNARKPFHQLSSCFVDTVPDSLDGIYRSIDNFSQVSKFGGGMGLYFGKVRAVGA
PIRGFQGAAGGILRWIKLANDTAVAVDQLGVRQGSVAVYLDVWHKDIPEFLQLRTNNGDD
RMKAHDVFPAVCYPDLFWKTVRDNLGASWYLMCPHEILTVKGYALEDFYAEEWEKRYWDC
VKDARISKRTIPIKELVRLVLKSVVETGTPFAFYRDHANRANPNGHRGIIYCSNLCTEIA
QNMSAINLVSVKITEVDGQKVVVQTTRPGDFVVCNLASLVLSNIDLSDDKELREVVRVAV
RALDNVIDLTYYPVPYAQVTNAYYRAIGLGVSGYHHVLAQQGIDWESDEHLAFADRIFER
INRAAIEASMTIAREKGAYGCFTGSDWCTGAYFRKRGYVSEDWQRLQREVATHGMRNGYL
LAVAPTSSTSIIAGTTAGVDPIMKQYFLEEKKGMLMPRVAPSLSQKTCPLYKSAHAVEQR
WSIRAAGLRQRHIDQAQSVNLYITTDFTLKQVLDLYVYAWEVGMKSLYYVRSQSLEIDLC
GYCAS
NT seq 2538 nt   +upstreamnt  +downstreamnt
atgcatatcatcaagcgaaatggcgaaccgcaaccttacatgcgcgagaaaataattgtt
gctatcagtgctgcttttagaagtgtccagaatcctcttgctcctgaagttcctgctatc
atcacagatcttgccgcggaggttgagcgacagctttttgagatgaaccgtgcgggcgtt
cctgttcacgtggaaaagattcaggactttgtcgaaaagactcttaccaaatacaatcac
agcgatgaagtgaagagttttatcctgtaccgtgacgatcgcacaaaaaagcgtattgca
agagaacagattgcgtgctgttttactgactcttcagtgctcggtgtactgaaagaaatc
caacaagactttccgtttcctgagtacagtctcgatgcactcgccagtaagttcctgctc
tttaaaaaagaagttacggacgagcgtcggagtatgcaactgcttattaaggcagcggtg
gaactgactgcccaagaggctccccagtgggagcttattgctgcgcgcttgcttatgctc
gacttttcactcgcgctaggaacatctttggaaaagttaaatattcactccttctacgag
aaaataacttatcttgaagaggccggtctatatggggtgtacatccgcacgcactatagt
cgggcagaaattgaggaagctgccacgtatcttgagtgtagtcgcgataaattgtttacg
tacagcagtctggatatgattctgcgtcgctatgtgatcagaacgcgtgcgcatgtacct
cttgaaactcctcaggagatgtttctcggtattgcactgcatctagcgatgaatgaaacc
caagatcgtatgcaatgggtaaaacgcttttatacagtcctcagcaagttgcaggttacg
gtcgcaacacctacgctttcaaacgcgcgcaaaccttttcatcaactttcctcgtgtttc
gttgatacggtgccagattcgctcgacggtatctaccgcagcatcgacaatttttcccag
gtatctaagtttgggggagggatggggctgtactttggaaaagtgcgtgcggtaggcgct
cccattcgggggttccagggtgctgcaggtggtattctccgttggattaagctcgccaat
gatactgcagttgcagtagatcaactaggagtacgccaaggctcggtggcagtgtatttg
gatgtatggcacaaggatattccggaatttttgcaattacggactaataatggggatgac
cgcatgaaagcacatgacgtatttcctgcggtctgttatccagatttgttctggaagaca
gtacgcgataatttgggggcgtcgtggtatttaatgtgtccgcatgagattcttacggtg
aaaggctatgctttggaggatttttatgcggaggaatgggagaagcgctactgggattgt
gtaaaggatgcgcgtatctctaagaggaccattccgattaaggagttggtgcgcttggtg
ctaaaatctgtggtggaaaccggtactccctttgcgttttaccgagatcatgcaaaccgt
gcaaatcccaatgggcatcggggaattatttactgttctaatttgtgtactgaaattgcg
cagaacatgagcgctattaatttagtaagcgtaaaaatcaccgaggttgatggacaaaag
gtagtggtgcagacaacgcggccgggggattttgttgtatgtaacctcgcgtcgttggtg
ctgagcaatattgacctttcagatgataaggagttgcgcgaggtagtgcgtgtggcggta
cgtgcattagacaacgtgatcgatttgacatattatccggttccctatgcacaggtaacc
aatgcgtattatcgtgctattggtttaggtgtttcaggctaccatcacgtgcttgcccag
caaggaatcgattgggaaagtgatgaacatcttgcatttgcggacagaatatttgagcgc
attaaccgtgccgcaattgaagcgagtatgacaatcgcgcgcgagaagggtgcgtatggg
tgtttcactgggagcgattggtgtaccggtgcgtattttcgcaaacgcggctatgtctct
gaagactggcaacgtttgcagcgtgaggtagcaacacatgggatgcgcaacggttactta
cttgcagtcgcgccaactagttctacgtctatcattgcagggaccactgcgggtgtagat
cctattatgaagcagtatttcctcgaggaaaagaaaggcatgctaatgccacgcgtagct
ccttctctttcgcagaagacctgtccactgtataaaagtgcacacgcagtggagcagcgt
tggagtatccgtgctgcgggtctgcggcaacgacatattgaccaggcacagtcagtgaat
ctgtacattacaacggactttacactgaagcaggttctagatttgtacgtgtatgcgtgg
gaagtaggaatgaagtcactatactacgtacgaagccagtcgctcgaaatagatttgtgt
gggtattgtgcctcgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (33)   

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