KEGG   Thermococcus profundus: A3L09_08765
Entry
A3L09_08765       CDS       T05153                                 
Name
(GenBank) Nonsense-mediated mRNA decay NMD3 like protein
  KO
K07562  60S ribosomal export protein NMD3
Organism
tprf  Thermococcus profundus
Brite
KEGG Orthology (KO) [BR:tprf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tprf03009]
    A3L09_08765
Ribosome biogenesis [BR:tprf03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    A3L09_08765
SSDB
Motif
Pfam: NMD3 EFP DUF4857 EF-hand_13 DUF555
Other DBs
NCBI-ProteinID: ASJ03342
UniProt: A0A2Z2MF28
Position
complement(1625081..1626250)
AA seq 389 aa
MGERFCYRCGISEEEGGPLIDGLCQVCFRKENPVLLIDDEVNTELCQNCGSYKRNGVWVD
PKSYELEELIFEVADNALLEALSKSLDERVKIFEVVPMDELEEVEELPVGKALVAFQPVD
WHIEYFPAIITYEVRVKARIHELQVELHDERKYVTVYVRQTVCPRCQKFLGGYFEAILQV
RADGRPLDEGERKRIENLVGEKVDEIMRKDRMGFIQDTIEKEEGLDFYMGSTSAARKLAQ
AIKERFGGTISEAYELVGVDRQTSREVYRTSVSVRIPRFRKGDIVTDRNGNVYEVERVDG
RGMTLRDLKTGEGEHRNWKSLKREGVEVVDAERSEAMVTSIGKDEVQMMDMKTYETYELE
KPDFEVREGEVYEMVGVKGRRYFLKRKSY
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgggcgagaggttctgctaccgctgtggaataagcgaggaggaaggcggaccactgata
gacggcctgtgtcaggtctgcttcagaaaagagaatccagttctcctgattgatgatgag
gtaaacaccgaactctgccagaactgcgggagctacaaacggaacggcgtctgggtggat
ccgaaaagctacgagcttgaggagctgatattcgaagttgccgacaacgcactgctggag
gccctctccaagtcccttgacgagagggtgaagatctttgaagtggttccaatggatgag
ctggaggaagtggaagaactgccggtgggtaaggctctggtggcttttcagcccgttgac
tggcacatagagtacttcccggcgataatcacctacgaggtccgcgttaaggccaggatc
cacgaactccaggtcgaactacacgacgagaggaagtacgttacggtctacgtccgccag
accgtctgcccccgctgtcagaagttccttggcggctactttgaggccatactccaggtt
cgcgccgacggcagacccctcgatgagggcgagaggaagaggatcgagaacctcgtcggt
gagaaggtcgacgaaataatgcggaaggacaggatgggcttcatacaggacacgatagag
aaggaggaaggtttggacttctacatggggtccacctcggcagcgagaaagctcgcccag
gccataaaggagcggtttggggggactatcagcgaggcctacgagctcgttggggtggac
aggcagacgagcagagaggtctaccgcacgagcgtcagcgtaaggataccgagattcagg
aagggcgacatcgtgaccgacaggaacggcaacgtctacgaggtggagcgcgtcgacggc
aggggcatgaccctcagggatctgaaaacgggtgagggggagcaccggaactggaagagc
ctgaagagggagggcgttgaggtagtcgatgccgagaggagcgaggccatggtgaccagc
attggaaaagacgaggttcaaatgatggacatgaaaacctacgagacctacgagctcgaa
aagccggatttcgaggtcagagaaggcgaggtatacgagatggtgggggtgaagggcagg
aggtacttcctgaagcgcaagtcttattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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