KEGG   Thalassiosira pseudonana: THAPSDRAFT_10006Help
Entry
THAPSDRAFT_10006  CDS       T01078                                 

Definition
hypothetical protein
Orthology
K11839  
ubiquitin carboxyl-terminal hydrolase 8 [EC:3.4.19.12]
Organism
tps  Thalassiosira pseudonana
Pathway
Endocytosis
Brite
KEGG Orthology (KO) [BR:tps00001]
 Cellular Processes
  Transport and catabolism
   04144 Endocytosis
    THAPSDRAFT_10006
Enzymes [BR:tps01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     THAPSDRAFT_10006
Peptidases [BR:tps01002]
 Cysteine Peptidases
  Family C19: ubiquitin-specific protease family
   THAPSDRAFT_10006
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
14
AA seq 1472 aa AA seqDB search
MAAKNNQRSQGNNNGGGGRSSNRRNQGTSYPPQKRSNGSPNQRGQQQYQQGDQQRQQQQQ
QQSQRQGASNQSLPQQAKRHQVHNQPQVQMSSAATSSQLQSPQPKYEWDPQNLQYFLSIR
SKMLQTLFATSLNEGATSATGSVGGGNGSVNGNNNYARSQSARLPMSPTRPTDNTTVNPS
LQPAQGMGRSQSVSNVNSPSRGGDSSQFATPTRNTADNNNTTTTNDEEDDSNNEINMALL
KELLPLPRDYYSIAVKNLLDTPLPLVDTSAADTEGGDTASQGETPTSTTTQLRQPKENES
IYLLSRIYLRVWCHWVRNSIVNTNVERWLSKLITNGGGGALRRYAGVVGGSSCQATNGEN
GNVRLFLLPSHALQTLAALSILTDQYQLWNGEEGEWIRWFDELKGLWVDWIDRREAIQMH
QQQQRGISTTTQKDEKKNDDEANVRQHHNLNQFLPLSPPGPVDLRILSSYGHPLRLRRSV
SLTMKGLTRGGGGEVMSVDEEMREECLMKFLSLGMKELPPTDASTGNNNSESAQRLAVCP
VSSSFYEMLRSNHGVLCEDRRSISFQRPVVSGDNGGREDDPTTLLYHDQSSIKTAKSSSP
SGSDIFYPSSASSSSPSNASQNVQRKPPSSRPIEFPRRVLISTLPLNKERDDYLELHRPS
STDSAHKMSPYSKLMKEAMSSRHEGQSSAMTQSTKKGCTVEVYPVEFRYVVVDGYMSGSD
ASCSNLYTAQGIAHASRVSTAGDVFRDLERNVAPNRTSAHVRLWIKSPSTVTPSANRNAT
QQPGDGYELIDSRPTLFDKKSRNEVPISVEKFLHLDEKSVWNQSAPVVVEILVELRSSPT
ARWVREPLELANRLQVGDFIDAQDNAHKWYEAIVRELTPETVRVHYFGWASKWDGVLPRR
KGVGPKNISPPAALWTHTTPWREKIKVGDEVEVRESASLVQRPKWYKATVIAVSREFDSP
REIAGGADLEQNDENEKGEKVPLVLLSRKRQILVRVPQEKHNVSTTVQPVGNTDGNIPIQ
PPYVRWINLYGEEVCKANTHNTAKKQTNTAPATVSYAVEPERKPVTVMKSFNNIHGTGFV
RESLRGVPPAPGSVGLHNLGNSCYMNSILQCINHIPSITQYFLKGEYQKEVNKNNPLGSG
GKVATAYASFLNDIWTGEYSILAPRLLKQIVGCYAPQFNNNYQHDSQEFHQYLMDGLHED
LNRVKDKPYVEDVEALGMKDDRAAIESWKKHLLRHDSLFVDYTQGLHRSHLTCPSCGKES
IKFDVYSSISLPLVPSKNRPSIPLEDCLDQFAAGEQLDEHNAWYCSGCKKHVCALKLITL
WNTPDVLVLHLKRFTYEKCSQVDGRIIRSKIEDKVDFPIDRLDLTPYVLGPKDPDAPPIY
KLFGVSEHTGATANSGHYTATVRNSKDGNWYRYNDSHVGTTSGDAAVTGGAYLLFYQRAK
GSLRWAGMEKEMMQHKGGFTDAEGWTAIGKKR
NT seq 4419 nt NT seq  +upstreamnt  +downstreamnt
atggctgcgaagaacaaccaaagaagtcagggaaacaacaatggcggaggagggagaagc
agcaatcgaagaaatcaaggcacgtcatatcctcctcaaaagagatccaacggatctcct
aatcagagggggcaacaacaatatcagcaaggggaccagcaacgtcaacaacagcagcag
cagcaatctcagaggcaaggagcgtcaaaccagagtctaccgcagcaagccaagaggcac
caggtgcacaatcaaccgcaggtgcaaatgtcatcagctgctacatcgtctcaactacaa
tctccccaaccaaaatacgaatgggatcctcaaaacctacaatactttctttccattcgt
tccaaaatgcttcagactttatttgccacctctttgaatgaaggtgcaacgagtgctacc
ggcagtgttggcggtggtaacggaagtgtcaatggcaacaacaactacgcaagatctcaa
tcagcacgtcttcccatgtcacccacccgtccaaccgataacacgactgtcaatccatca
ttgcaaccggcacaaggcatgggaagaagtcaatcagtttctaatgtcaactctccatct
cggggaggggattcttcgcagttcgcgacgcccactcgcaacactgccgataacaacaac
actacaactacaaatgatgaagaagatgattccaacaatgaaataaacatggcactgtta
aaagagctacttcctcttccaagagattattactctattgctgtcaagaacttgctcgat
actccgttgccgttggttgatactagcgctgccgatactgagggaggggatactgcatct
caaggggaaacacctacatctacgactacgcagttacgtcaacccaaagaaaacgaatca
atatacctcctttctcggatctacctccgtgtttggtgccattgggtgaggaattcgatt
gtaaataccaatgtggaacggtggttgtcaaagctcatcactaacggtgggggtggcgcc
ttgaggaggtatgcgggagtggtgggaggaagctcatgtcaagccacaaatggggagaac
ggcaatgtcaggttgttcttactgccgtcgcatgcgctgcagacattggcagctctgtcg
atattgacggatcagtatcagttgtggaatggggaggagggggagtggataagatggttt
gatgagttgaaaggactatgggttgattggatagatagacgagaggcaattcagatgcat
caacaacagcaacggggtatttcaacaacgacacaaaaagatgaaaagaagaacgatgat
gaagccaacgttcgtcaacaccacaaccttaatcagtttctaccactctcccctcctggt
cctgttgacctacggattctttcaagctacggccatccacttcgattacggcgttctgtt
tccttgacaatgaagggattgacaagagggggcggcggtgaagttatgagcgtggacgag
gagatgagggaggaatgccttatgaagtttctctcgttgggaatgaaagagctgcctcca
actgatgcaagtacaggaaacaacaacagtgagtctgcacagaggttagcagtctgtccc
gtctccagttccttttacgaaatgctccgctcaaatcatggagtattgtgcgaagatagg
cgttcaatatcctttcagcgaccagttgtcagtggtgataacggagggagagaggacgat
cccacgacgttattgtaccatgatcaatcatcaatcaaaactgctaagtcttcgtctcca
agtggatctgatatcttctatccatcctctgcatcatccagttcaccatccaacgccagt
caaaatgtccaacgcaagccaccgtcatctcgtccaattgaattccctcgccgtgtcttg
atatcaacgcttcctctaaataaggagagagatgattatcttgaacttcatagaccttcg
tctaccgatagtgcccacaaaatgtcgccatattcaaagctgatgaaggaagcaatgtca
agtcgccatgagggacaaagctcggcaatgacacaatctacaaagaagggatgcacagtg
gaagtctacccagttgaatttcgttatgtagtagtagatggatatatgtccggatcagac
gcaagctgcagcaacttatacactgctcagggaattgctcatgcatctcgtgtctctaca
gctggtgatgtgtttcgtgatttagagcggaacgtggcacccaatcgaaccagtgcacat
gtgcgtctttggataaagagtccttccaccgttactccatccgcgaatagaaatgcaaca
cagcagccgggagatggatatgagttgattgactcgcgaccgactttgtttgacaagaag
tcgaggaacgaagtgccaatatctgttgagaagtttctacacttagatgaaaagagtgtg
tggaatcaatctgctcccgttgtggtagaaatactcgttgaacttcgtagtagtcccaca
gctcgatgggtgagagagccactggagttggccaaccgattacaggttggggacttcatt
gacgcccaagacaacgctcacaagtggtacgaagcgattgttcgagagttgacaccagaa
acagtccgcgttcattactttggatgggcttccaaatgggatggagtgttaccacgaaga
aaaggagttggaccaaagaacatatctcctcctgcagctctgtggacacacacaacgcca
tggagggaaaaaatcaaagtgggagatgaagtagaagtgagagagtcggcttcgttggtg
caacggccaaaatggtacaaagcgacagtgattgctgtgagcagggaattcgatagtcca
cgagagatcgcgggaggtgctgacttggaacagaatgacgaaaatgaaaaaggcgaaaag
gttcctctggtactactcagtcgtaaacgacaaatacttgtcagagtgccccaggagaaa
cacaatgtatccacaactgtgcagccggtagggaacacagatggcaacattcccatccag
ccgccttacgtacgatggattaatctatatggagaagaagtatgcaaagccaacactcac
aacacggcaaagaagcagaccaacactgctcctgcaaccgtcagttatgcggtggaacca
gaaaggaagcctgtcactgtcatgaaatcattcaacaacatacatggaacaggatttgtc
cgtgagtctctccgaggtgttccaccggctcctggatccgttgggctccacaatttgggc
aacagttgctatatgaactccatccttcaatgtataaaccatatcccatcaatcactcaa
tatttcttgaagggtgaataccagaaggaagttaacaagaataatcctcttggaagtggt
gggaaagttgcaactgcgtacgcttcttttctgaacgatatctggacgggagagtattca
atattggcaccgcggttgctgaagcaaatagtgggatgttatgcaccgcagttcaataac
aactatcaacacgatagccaggagttccatcaatacttgatggatgggctacacgaagat
ctaaatcgagtgaaggacaagccatacgtcgaggacgttgaagcccttggaatgaaagac
gatagagcagctattgagtcgtggaagaagcatttacttcgccacgatagtctcttcgtc
gactatactcaaggattgcatagaagccatctcacctgcccaagctgtggtaaggagagt
atcaagtttgatgtttactcgtcaatttcgctgccattagtaccttcaaagaataggcct
tcaatcccactcgaggactgcctcgaccaattcgcagctggagaacaattggatgaacac
aacgcgtggtactgctcaggttgcaagaagcacgtttgtgcattgaaattgattacgttg
tggaacacaccggatgtgctggtactccatctcaaacgatttacgtacgaaaaatgctcc
caagttgacggtcgtatcataagaagtaagattgaggacaaagtcgacttcccgatcgat
cgtttagatttgactccttatgttctcggtccaaaagatcccgacgctcccccaatctac
aagctattcggagtcagtgaacacactggagccacggctaacagtggtcactacacagct
accgtacgaaactcaaaggacggaaattggtatagatataacgattcccacgttggcact
acttccggcgatgctgcagtgactgggggggcgtacttgctgttttaccagcgagcgaaa
ggatctctacgatgggccggaatggaaaaagagatgatgcagcacaagggcggatttact
gatgctgagggatggactgcaataggaaagaagcgatag

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