KEGG   Thalassiosira pseudonana: THAPSDRAFT_12810
Entry
THAPSDRAFT_12810  CDS       T01078                                 
Name
(RefSeq) importin beta-1 subunit-like protein
  KO
K14293  importin subunit beta-1
Organism
tps  Thalassiosira pseudonana
Pathway
tps03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    THAPSDRAFT_12810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tps03009]
    THAPSDRAFT_12810
   03036 Chromosome and associated proteins [BR:tps03036]
    THAPSDRAFT_12810
Ribosome biogenesis [BR:tps03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    THAPSDRAFT_12810
  Pre-60S particles
    THAPSDRAFT_12810
Chromosome and associated proteins [BR:tps03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    THAPSDRAFT_12810
SSDB
Motif
Pfam: HEAT HEAT_EZ HEAT_2 IBN_N MMS19_C DUF3385 Vac14_Fab1_bd Htt_N-HEAT_1 Tra1_ring Arm PDS5 DUF577 Sec7-like_HDS
Other DBs
NCBI-GeneID: 7451373
NCBI-ProteinID: XP_002289979
JGI: 12810
UniProt: B8C0H0
Position
4:complement(2082843..2085245)
AA seq 801 aa
MATDLTTTLLSCQNPDPTIRQAAEAALATAEQTNLADFFLALATELSTEGKDVTTRQLAG
LHFKNLLVAKDDALQSQKHNKWKALPQEQRAVIKSTMMSAIRSPVPIARHTAAQACAEIA
TVELPYKEWPEFLAILMENVTSTTLDDGVKIASLECLGFTCERISLIPDSPEISPDTTDL
MLTTIVDGIRADRPDAIRLAAATALRNSLAFTRKNMDNENERNMIMKTICEATQSGDARV
RAAAYECIVQIAYQYYDKLESYMQTLFQLTFATIRSDEEVVALQAIEFWSTLAEEEMELI
DLAAEAAETGQPVPPESVCVGYVKAALDHLCPLLTETLTKQDEDLEVDDDVWNLSMSGAT
CLTLVANTVEDAVVPVIMPFVQQNIQSDNWRNREAATMAFSSILEGPSGDVIGPFVNQAI
PVLLNALSDQNDLVKDTTAWTLGRICDLHVRAIPEDTFPTLVNGLAAKLLTETPRVSSQA
CFGIHNLAAAFQNDSAAQQSGTNALSNYMATLLQTLLQVVDREDATESNLRIGAFEAISV
LIQNAAPDCLPVLMQLLPAIVDRLAQSFSMPTLTNEDKEQKEGVQGLLCGLIQVIAIKTT
KEEIAPFCDGIMTNFLQVLQTKNATCHEEALSATSAIATILEGDFLKYMAALQPFLMAGL
RNFEAYQVCTVAVGLVGDISRAIEGKLQPFCDEIMSALIEALQNAALHRSVKPPVLSCFG
DIAMAIGAAYEPYLQLSLMMLLQAAQTRAPEDDEELIDYVNVLREGILEGYTGIIQGLKD
GQRIELIVPYVEAIMGFLEML
NT seq 2403 nt   +upstreamnt  +downstreamnt
atggcgaccgacctaacgacaaccctcctctcctgccaaaatcccgaccccaccatccgc
caagccgccgaagccgccctcgccaccgccgaacaaaccaacctcgccgacttcttcctc
gccctcgccaccgaactctccaccgaaggcaaagacgtgaccacccgccaactcgccggg
ctgcacttcaagaacctcctagtcgccaaggatgacgccttgcagagccagaagcacaac
aagtggaaggccttgccgcaggagcaacgggcggtgatcaagagcaccatgatgagtgcg
attcggagtccggtgcccatcgcgaggcataccgccgctcaggcgtgcgcggagattgca
acggtggagcttccgtacaaagagtggcctgagttcctcgccattttaatggagaatgtc
acctccaccacgctggatgacggggtcaagattgcctccctcgaatgtttgggattcacg
tgcgaacgcatctcgcttatccccgactctcccgaaatttcccccgacaccacggatctc
atgctcaccaccattgtagacgggattcgcgccgatcgtcccgatgccattcgtttggca
gcggcaactgcccttcgtaactcgttggcatttacacgaaagaacatggacaatgagaat
gaacgcaacatgattatgaagacgatttgcgaggctacgcagagtggggatgcgcgagtt
cgtgccgctgcctatgagtgtattgtgcagattgcatatcagtattatgataagttggag
agttacatgcagacgttgtttcagcttacgtttgcgacgatccgtagtgatgaagaggtg
gtggcacttcaggctattgagttttggagtacgctcgccgaagaggagatggagttgatt
gatctggcggccgaggcggcagagactggacagcctgttccccccgagagtgtgtgcgtg
gggtatgtcaaggcggctttggatcatttgtgtcccctcttgacggaaacattgacaaag
caagacgaagatcttgaggttgacgacgacgtgtggaatttaagcatgagtggtgccacg
tgcttgactcttgtggcgaatacagtggaggatgcggtggttcccgtcattatgcctttt
gtgcaacagaatatccagtcggacaattggcgtaatcgtgaggctgctaccatggcattt
agttccattttggagggacctagtggagatgtgattggaccgtttgtgaatcaggcaatt
ccggtcttgttgaatgcgttgtctgatcagaacgatttggtgaaggatactactgcctgg
actcttggccgtatatgcgacttgcacgttcgagctattccggaagatacttttcctacc
ttggtgaatggacttgcggccaagctcttgacggagactcctcgtgtttccagccaggcc
tgctttggtattcacaacttggccgcggcattccagaacgacagtgctgcccaacaatcg
ggaaccaatgccctcagcaattacatggctacgcttcttcagactcttcttcaggtggtg
gatcgtgaggatgctaccgagtccaacttacgcattggtgcctttgaggccattagcgtg
ttgattcaaaatgctgccccggattgtctccccgttcttatgcagttgttgcctgccatt
gtcgaccgtcttgcgcaaagcttcagcatgcccacgttgacgaatgaggataaggaacag
aaggagggagtgcagggacttctttgtggtttgattcaagttattgccatcaaaactacc
aaagaggagattgctcccttttgcgatggtatcatgaccaactttcttcaagttcttcag
acgaagaatgctacctgtcacgaggaagctctcagtgccacttctgctattgcaaccatt
ttggagggagactttttgaaatacatggcggctctccaacccttcttgatggctggattg
cgtaattttgaagcctaccaagtgtgcaccgtcgcggttggtctcgtgggtgatatcagt
cgtgctattgagggtaaattgcaaccattctgtgatgagatcatgtcagctttgatcgag
gcccttcagaatgcggcattgcatcgtagtgtcaagcctcccgtactctcttgctttggt
gacattgccatggctattggcgctgcctacgagccatacctgcagttatcgctcatgatg
ttgttgcaggctgctcaaactcgtgcaccagaggatgacgaggagcttattgattacgta
aatgttttgcgagagggcattctcgaggggtacactggaatcatccaaggattgaaggat
ggacagcgtattgaactcatcgtcccctacgttgaggctatcatgggcttccttgaaatg
ttg

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (254)   
   KEGG ORTHOLOGY (1)   
   RefGene (249)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (275)   

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