KEGG   Thalassiosira pseudonana: THAPSDRAFT_13806
Entry
THAPSDRAFT_13806  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K01886  glutaminyl-tRNA synthetase [EC:6.1.1.18]
Organism
tps  Thalassiosira pseudonana
Pathway
tps00970  Aminoacyl-tRNA biosynthesis
tps01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    THAPSDRAFT_13806
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:tps01007]
    THAPSDRAFT_13806
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tps03016]
    THAPSDRAFT_13806
Enzymes [BR:tps01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.18  glutamine---tRNA ligase
     THAPSDRAFT_13806
Amino acid related enzymes [BR:tps01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   THAPSDRAFT_13806
Transfer RNA biogenesis [BR:tps03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    THAPSDRAFT_13806
 Prokaryotic type
   Other AARSs
    THAPSDRAFT_13806
SSDB
Motif
Pfam: tRNA-synt_1c tRNA-synt_1c_C tRNA-synt_1c_C2
Other DBs
NCBI-GeneID: 7453292
NCBI-ProteinID: XP_002291547
JGI: 13806
UniProt: B8C444
Position
6:complement(1407354..1409024)
AA seq 538 aa
IRTRFPPEPNGYLHIGHAKSMNMNFNLAFEKLGVPMENRRTIFRYDDTNPDAESPEYIDS
LRRDLEWLGWQPERTTYSSDNFQTLYELAVKLIENGLAYVCDMTKAEMEAQQAPIPSEDV
LPGRNRNTSVERNLKLFEEMKLGLHDEGAMTLRLKMDFESANPNMYDLVAYRIRYTPHPH
AGKGWCIYPNYDFTHGICDSLERIDYSICTLEFETRREPYYWILWALDMYRPKVYEMSRL
NLEYTVLSKRRLLKLVNANWVRGWDDPLMPTISGLRRRGYTKEIINSFCNDVGATRAMNV
VEMVKLFQVARLKLAESTRRAMAVLEPIKIVITNFGEESAKAGEGGLTYEVQNSPTDPSY
GSHSVTLTETIYIDSEDFRLEDDPSYFRLSPNQPVGLKYHGGNLVCDDIVRDGGNVKVLK
CHLDTTEGRPKPKSHISWVPCDGIPCEVRVYNHLFTVAEPSDRWEEELNSEREIVYANAI
IDPSVLELVDKKDVDKWKSNQALQFERLGYFVVDTDTTFDSSTKSGKLVFNRTVSLKE
NT seq 1614 nt   +upstreamnt  +downstreamnt
atacgcacgcgtttcccacccgagcccaatggctaccttcacattggacatgccaagagt
atgaacatgaattttaacctggcgtttgagaagttgggtgtgccaatggagaataggagg
actatctttcgatatgatgatacgaatcctgatgcggaaagtccggagtacattgattcg
ctgaggagggatttggagtggttggggtggcagcctgaacgcactacctattcttcggat
aactttcaaaccttgtatgagctggcggtcaagttgattgagaacggattggcctacgtg
tgtgatatgaccaaggcagagatggaggctcaacaggctcccattcctagcgaggacgtg
ttgccgggaagaaatcgcaacacttctgtagagaggaacttgaagctatttgaagagatg
aagttgggattgcatgatgagggagccatgacgttgcgtctgaagatggactttgagtcg
gccaatcccaacatgtacgatttggtagcgtaccgaatccgctacactcctcatcctcat
gcaggcaagggatggtgcatctatcccaactacgatttcactcacggtatctgtgactcg
ttggaacgtatcgactattccatttgcacgttggagtttgagacgaggagggagccttac
tattggattctgtgggcgttggacatgtatcgtcctaaggtgtatgaaatgtctcgtctc
aatttggagtacacggtgttgagtaagcgacgattgctgaagcttgtcaacgccaattgg
gtccgaggttgggacgatccattgatgcccacaatcagtggtcttcgtcgaaggggatac
accaaggaaatcatcaactccttttgcaatgacgtcggtgctactcgtgctatgaacgta
gtggaaatggtcaagttgttccaagtggcacgtttgaagttggcagagagtactcgtcgt
gccatggctgtgttggaacctatcaagattgtcattactaactttggtgaagagtctgcc
aaggctggggagggaggtttgacgtatgaggtgcaaaactcgcccactgatccatcttat
ggatcgcacagtgtgactttaactgagacaatttacattgattcggaagactttcggttg
gaggacgatccgtcgtatttccgtctttcgccaaatcaacctgtcggcttgaagtatcat
ggtgggaatcttgtctgtgatgacattgttagagatggaggcaatgtgaaggttctgaaa
tgtcacttggatactaccgagggacgccccaagcccaaatcacatatcagttgggttcca
tgcgacggtattccttgcgaggttcgcgtttacaaccatttgtttacagtggcggagcca
tctgataggtgggaagaggagttgaactcagagcgcgagattgtctacgccaatgccatt
attgatcccagtgtgctggagctcgtcgacaagaaggatgttgacaagtggaagtcaaac
caggcacttcagtttgaacgtcttggatactttgttgtggacaccgatacaacctttgac
tcttccaccaaaagtggaaagcttgtcttcaatcgcactgtcagcttgaaggag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (102)   
   KEGG ORTHOLOGY (1)   
   RefGene (97)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (123)   

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