KEGG T01078: THAPSDRAFT

Thalassiosira pseudonana: THAPSDRAFT_16926

Entry

THAPSDRAFT_16926 CDS T01078

Definition

hypothetical protein

Orthology

K14016

ubiquitin fusion degradation protein 1

Organism

tps Thalassiosira pseudonana

Pathway

tps04141

Protein processing in endoplasmic reticulum

Module

tps_M00400

p97-Ufd1-Npl4 complex

Class

Genetic Information Processing; Folding, sorting and degradation; Protein processing in endoplasmic reticulum [PATH:tps04141]

SSDB

Motif

Pfam:

UFD1 CDC48_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

AA seq 178 aa
FEEQYHCYSAAYADKSQLEQGDKILLPPSAFDILARLQVDYPMLFQLQSGDKGTLTHCGV
LEFTAEEGSCVIPFWMMQNLLIEEGAVLTVTNVSLPKANFVKFQAQHVDFLEISNPRAVL
EHALRNFSCITKGDVICVPYNSKNYHFEIKEVRPQDAACIIETDCNVDFDAPVGYKEP

NT seq 534 nt +upstreamnt +downstreamnt
ttcgaagaacaataccactgctactccgcagcctacgccgacaaatcccaactcgagcag
ggcgacaaaatcctcctcccgccctcggcattcgacatcctcgcccgcctgcaggtggat
tatcccatgctgtttcagctccagagcggagacaaaggcaccttgacccattgtggcgtg
ttggagtttacggcggaggaggggtcgtgtgtcattccgttttggatgatgcagaatttg
ctcattgaggagggggcggtgttgaccgtgacgaatgtgtcgctgcccaaagcgaacttt
gtcaagtttcaagcgcagcatgtggactttttggagatttctaatcctcgtgccgtgttg
gagcacgcgttgaggaactttagttgtattaccaagggggatgtgatttgtgttccgtac
aactccaagaattatcattttgagatcaaggaggtacggcctcaggatgcagcgtgtatt
attgagactgactgcaatgtcgactttgatgctccggtggggtataaggagccg

All links

Pathway (2)   
   KEGG PATHWAY (1)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-TPS (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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