KEGG   Thalassiosira pseudonana: THAPSDRAFT_21220
Entry
THAPSDRAFT_21220  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K10885  ATP-dependent DNA helicase 2 subunit 2
Organism
tps  Thalassiosira pseudonana
Pathway
tps03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    THAPSDRAFT_21220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tps03400]
    THAPSDRAFT_21220
DNA repair and recombination proteins [BR:tps03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     THAPSDRAFT_21220
SSDB
Motif
Pfam: Ku LRR_6
Other DBs
NCBI-GeneID: 7450193
NCBI-ProteinID: XP_002287750
JGI: 21220
UniProt: B8BTZ8
Position
2:complement(673536..677363)
AA seq 1003 aa
MSGKEAIVFILDSNHSMNAPYPPGGYTTTSTSPSAVGGNPPSPIKSNPTAINVDEYDDAT
VDLETQSTRLSSAKDSILAKISELAFRSKTNEVGVVVLKTKRTHHHMFLSDAADDGLSKL
FRSSSSRMDNYYDDDDDENPPFPNLVEFNLNRPSPHLLRDIHSIQSTTTPHPSSSSTIQG
DFCDGIILAADTLYRRTAGKKYIRKIILFTDAEHEVRIDGEQLETVLSGLEKMDCSLEVV
GIGFDVENTGSFRIKEEEKVEGDEGEGDEDGDGGADSDENDVEEETDVKEEGDADGDNLK
MDVGQSENDIKLLIKRENEKLLVSLAQQTGGCVMAANGQDISALLETNDPRNNEGMTKSI
RGKFILSKYVDAATIPYLKREAYVLDSTTGLPQRDGLGELITCGVDRNTTHWIEEDPDVP
NEGLLEVPLDSRTDAYRFGSDLIPVGKMDMLGIKAAFASPRSIEMIGYISKRDVISSGLC
MGPAYVVLGGKESKKSRGAIAALSLAMEEKGVWGFCRFVKSVNGDPCIGVLIPKLVGSDG
GNGEGGRFLALLQLPFADDISHISTPAVPAENWGDDKEAKACDSLVESMMLEDDELDSTT
ISSPSIQAYHRMITHFAMDPLTGEVELNGDLPEEKILMASHASPLCELGVVKSLSMKASN
QINAFLETFPREKIALDGDKKENKKHWGDDSQTSSSSPSSIRLGPQLMNRSSSLDVIPPH
NQLVPYWSLLSKAFEERNTIDMWIVADALSMAFKSHPCLQSVTLDRCKVGNDTRVLATLL
NGMKHVKTISLKGNNITSEGAHIIAHFLDGNACSTHVHLDDNPIKDDATFSFASALKQNT
TLRFLGLNNTEISELGNIILRRALFDTSSLNSVADSNHDCVISIDWSSLALGWKIPDING
KRSWSKERKVKAKILLALCIMNEVPLKLSYFDEVPLEIMPYILAMIQEHIVDDGHGWYYR
YLSGGVITEDEAKQKKTAFEIKSLNRLFHTLKGWHRDHDFCEL
NT seq 3012 nt   +upstreamnt  +downstreamnt
atgagcggcaaggaggcaatcgtcttcatcttggactctaaccattccatgaatgctccc
tatccacctggaggctacacaaccacctcaacgtctccatcggcggtaggtggcaacccc
ccctctcccatcaagtcaaatcctactgctattaatgtagatgaatacgacgatgcgaca
gttgatctcgaaacacaatccactcgtctaagtagtgccaaggattcaatactagctaaa
atcagcgagcttgcctttcgttccaaaaccaacgaagttggcgttgtcgttctcaagacg
aagagaacacatcatcatatgttcttgtccgatgctgctgatgatgggttgagcaagttg
tttcgaagcagttcatcacgaatggacaattactacgatgacgacgatgatgagaatcct
ccatttccaaacttggtggagttcaatctaaacagaccatctcctcacctcctacgtgac
atacattccatccaaagtaccaccactcctcatccctcatcatcttctacaatccaaggt
gacttttgcgacggcatcattctagcagctgacacactctaccgtcgtaccgcaggaaag
aagtacattcgcaagattatcctcttcaccgatgcagagcacgaggtacggattgacgga
gaacaattggagacagtgctgagtgggttggagaagatggattgttctttggaagttgtg
gggattggatttgacgttgagaatacagggagttttcgtatcaaggaggaagagaaggtt
gagggtgatgagggagaaggtgacgaggatggtgatgggggtgctgattcggatgagaac
gacgtggaagaagaaactgacgtcaaagaagagggagatgctgatggagacaatctcaag
atggacgttggccagtcagaaaatgatatcaagctactcatcaaacgagagaatgaaaaa
ttgcttgttagccttgctcaacaaactggtggatgcgtcatggcggcaaacggtcaagat
atctcggcactactcgaaaccaacgatcccaggaacaacgaaggaatgaccaaatcaatc
agaggcaagttcatcttgtccaagtacgttgatgccgcgactattccatacctcaaacgt
gaggcttatgtgttggattcaacgacggggctgcctcagcgtgatggacttggtgaacta
attacgtgtggagtcgataggaatacaactcattggattgaagaggatccagatgttcct
aacgagggacttcttgaggtgcctttggacagcagaacagatgcctatcgttttggtagt
gatcttatccctgtcggaaagatggatatgttgggtatcaaagctgcgtttgcttctcca
aggagtatcgagatgataggatacatctccaagagagacgtcatctcttcaggactttgc
atgggaccggcgtacgttgtgttaggaggcaaagagtccaagaagtcacgtggagctatt
gcagcattgtcattggcgatggaagaaaagggtgtttggggcttttgtcgcttcgtcaag
tcagtcaatggggatccttgtattggagtgttgattccaaagctcgttggcagcgatgga
ggaaatggagaaggaggaaggttccttgcacttcttcagctaccctttgctgatgacata
tctcacatctcgactccagcagttccggctgagaattggggcgacgacaaggaagcgaaa
gcatgtgactctttggttgagtcaatgatgctagaggacgatgaacttgacagtacaacc
atttcctctccttctattcaagcgtatcatcgtatgattactcatttcgcaatggatcct
ctcaccggtgaagtggagctcaacggagacctacccgaggaaaagattctgatggcttcc
catgcaagccctctttgtgagttgggtgtggtcaaatcactgtcgatgaaggcatcaaat
caaatcaatgcatttttggaaacattccctcgcgagaagattgcacttgatggcgataag
aaggaaaacaagaagcattggggagatgatagtcaaacatcgtcctcttctccgtcatct
attcgtctgggaccacagttgatgaatcgttcaagctcgcttgatgtcataccaccccac
aaccaactcgtaccttattggtcattactatcaaaggcttttgaagaacgcaataccatt
gatatgtggatagttgcagacgccttatctatggcgtttaagagccatccttgcctacaa
tccgtaactttggatagatgcaaagttggaaatgatactcgtgtccttgcaacgcttctc
aatggcatgaaacacgtcaagacgattagtctcaagggcaacaatatcacatcagagggt
gctcacattattgcacactttttggacgggaacgcttgctctacacatgtacatctggac
gacaacccaatcaaggatgatgcgacattcagttttgcatctgccttgaagcagaataca
actctgagattcctcggattgaacaacaccgagatatccgagctaggaaacataatattg
aggagagctctctttgacacaagcagtttgaactctgttgctgattcaaaccatgattgt
gttattagtatcgattggagctcactagcattgggctggaagatccctgatataaatggt
aagagatcttggagcaaagaaaggaaagtcaaggccaagatcttgcttgcactttgcatc
atgaatgaggtacctctcaaactcagttatttcgatgaagtacctctcgaaattatgcct
tacattctagctatgattcaagagcacattgtcgacgatgggcacggttggtactaccgc
tatttgtctggaggtgtcataacggaagatgaagcaaaacaaaagaagacggcgtttgag
atcaagtcattgaatcgtttatttcacacactgaaggggtggcatcgagaccatgacttt
tgtgagctgtga

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