KEGG   Thalassiosira pseudonana: THAPSDRAFT_22897Help
Entry
THAPSDRAFT_22897  CDS       T01078                                 

Definition
hypothetical protein
Orthology
K11835  
ubiquitin carboxyl-terminal hydrolase 4/11/15 [EC:3.1.2.15]
Organism
tps  Thalassiosira pseudonana
Class
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
5
AA seq 1078 aa AA seqDB search
MSSRASCETSASITSSNLAQSIRYKEDGNRFFNLKHYTAGIACYRRGLEELPCAIADKSS
NNRKSKEERDVEVALRSNLALLLLRLAEETTDNTAQSHEQRHQWYLECETECTTVLEVNP
SKAKIHYRRGHARSLLADCCKRDPLKQSEYWSGAESDFKQCEEVLQAQLEKNKWNDNVPT
QSTKDILKDIMAARKALQQIHSSRATVGRQKTKPKILASGGKQSFVVHTPTNDEMEVNAT
PNTKFVSSNLTTGYTPEHNRPTPIEQKEFIASLLSRQCSPNDESSIVATQTPIAGEAFFL
INMDWWQKWCQYVGFFTMYGGSDNKNNQNGESTRGASSKRELEEIDEMNARVLQLLPPGA
TIPQYIEMDRKDAITPTKKEDTHQQSSNVSLSSSSSSDDDSVTEGTMRISPGVIDNSSLI
LPDTNGVWYSKQCIEGNSNEDNKTVLLKNYLVRGYHFEVLPREAFAAFRCWYGETSPTLF
RRATIMNELPWISQKKQSTCLSVRLPLYTEQWNVILHNPNGQHLRTDESSTALCGACRAP
CATRLTCSKCHSVRYCRKECQRSHWSPYHKAVCRILSEQQQSGDANPNRGLIPESKVWGR
VGLNNLGNTCFMSSAVQCIGHVAPLTRYFLRDSFLDDINEHNALGTGGKVANAYAFTMKA
IWMGGHQHRSISPSALKRAIELFAPQFSGVQQQDSAEFVTYLLDALHEDTNRVRHPPYVE
FPDVDLSKKLSISGAEAWDKHCIRNSSEVFDTFYGLYKNACVCPICDTSYVKFETFNHLT
LEIPQRKAFDLEVILVRDFANTEEVSLPLRYCVSVPQDCTINDLKASLSKLSGVRRQMLA
ICSMKDNRISKLHKNNDHVSLLLNGGQIFAYEVTPVEEEDRTSFDSPEIHAFVNQCIIID
NKTRNLGVPFFVSFGKRIGCEEVYNRVWNYVKPFVIVGKEDDAPFQAMVKSKMRIRVVDQ
YFTTKDNITTQILPQSSSEQLVELLGYQIEDNVMELSLEWADIIDINSQPVHSGLVHISN
FYQVLNHSCVEEYHQRTQQHQNHSNVMTLDDCIASFIRPEWLDSENKRSRYGDFQTFS
NT seq 3237 nt NT seq  +upstreamnt  +downstreamnt
atgtcgtcacgtgcctcttgtgaaaccagcgcctccatcacgtcatccaatttagcacaa
tccatacgctacaaagaggatggcaatcgcttcttcaatctaaaacattacactgcaggt
attgcatgctaccgccgtggccttgaggagctaccgtgtgccatcgccgacaagtccagc
aacaacaggaaatcaaaggaggagagagatgtcgaagtagctttacgatccaaccttgca
ctgttgctgcttaggcttgccgaagaaacgacagataacacggctcaatctcacgagcaa
cggcaccagtggtatcttgaatgcgaaacagagtgcacaactgtattagaagtgaatcca
tcaaaggcaaagattcactaccgcagaggtcacgcacgttctctcttggcagattgttgc
aaaagggacccgctgaagcagtctgaatattggtctggtgcagaatctgattttaagcaa
tgtgaagaagttctgcaagcacaattggaaaagaacaagtggaatgataatgtacccacg
caatcaacaaaagacatactgaaagatatcatggctgccagaaaggctctacagcagata
cattcttcaagggctactgtcggtaggcaaaaaacgaaaccaaagattcttgcctccggg
gggaaacaatcatttgtcgtacacactcccaccaatgacgagatggaagtaaatgccacc
cccaataccaagtttgtttcatcaaacttgacaactggctacacgcccgagcacaataga
cccactccaatagaacaaaaagaattcatcgcaagtttgctatcgcgccagtgctctccg
aatgacgaatcatcaattgtggcaactcaaactcctattgctggagaagctttctttctc
atcaacatggattggtggcaaaagtggtgccaatacgttggattcttcacgatgtacggg
ggaagcgacaataaaaacaatcagaacggagagagtactagaggagcaagcagtaagcga
gaacttgaagagatagatgagatgaatgcccgtgtcttgcaactgcttccaccaggagca
actatcccacagtacatcgaaatggacagaaaggatgcaatcacgcctacgaagaaggag
gatacccaccaacaatcttcaaatgtttcattgtcatcttcgtcgtcgtcggacgatgac
agtgtcacagaaggcactatgcgaatttctcctggcgtgatagacaattcgtcgttgatc
ctacccgacacaaacggagtttggtacagtaaacaatgcattgaggggaacagcaacgag
gacaacaaaacagttctattgaaaaattacttggtgagagggtatcactttgaagtgctt
ccacgagaagcattcgccgcttttcgttgttggtacggagagacgtctcctactttgttc
cgtcgagcaactattatgaacgagctgccgtggatatcgcaaaagaagcaatctacatgt
ctttctgtacgcttaccactctacactgagcagtggaatgttatcttacataatcccaat
gggcagcatctacgcaccgacgaaagtagcactgcattgtgtggtgcttgtcgagcgcct
tgtgctactcgattgacatgttcgaagtgccactccgttcgatactgcagaaaggaatgc
caacgaagtcattggtccccgtaccacaaagcagtctgccgcatactatcggagcaacaa
cagtcgggtgatgcaaatcccaacaggggattaattccggagagtaaagtttgggggagg
gtggggttgaacaatctcggcaacacttgcttcatgagttctgctgtccagtgcattggc
catgtagcgccgttgactcgttacttcttgagggatagctttcttgatgacatcaacgag
cacaacgctctcggaacaggaggcaaagtggcaaacgcttatgcattcacaatgaaagcg
atttggatgggaggtcatcagcacagaagcatcagtccttcagcattgaaacgggcgatc
gaactctttgctcctcagttctctggtgtgcagcagcaagattctgctgagtttgtcaca
tatctgctcgatgcattacatgaagatacaaatagagtgcggcaccctccgtatgttgag
ttccccgatgttgatttgagcaagaaactttcaataagcggagctgaggcatgggacaag
cattgcattcgcaactcaagcgaagtctttgacaccttctatgggttgtacaagaacgct
tgtgtctgtcccatctgtgatacatcttatgtaaagttcgaaacattcaatcacctcacc
ttggagataccgcaacggaaagcattcgacctcgaggtcattctcgttcgtgattttgcc
aatacagaggaggtgtctttacccttgaggtattgtgtatcggtgcctcaagattgcacc
atcaacgatttgaaagcttcactcagtaagttatctggagtgcgacgtcagatgttggct
atctgcagcatgaaggacaatcgtatatccaagctacacaagaacaacgatcatgtgtcg
ttgctgctaaatggaggtcagatattcgcctatgaggtaactcctgtcgaagaagaagac
cgaacaagtttcgattcgccggaaatccatgctttcgtcaaccagtgcatcatcatcgac
aacaaaacacgaaatcttggtgttcccttcttcgtgtcttttgggaagcgcattggatgt
gaggaggtatataacagggtatggaattacgtgaagccgtttgttattgtaggaaaagag
gacgacgcaccgtttcaagccatggtcaaatcaaagatgagaataagagttgttgatcag
tattttacaacgaaggacaacatcaccactcagatccttcctcaatcctctagcgagcag
ttggtggaattacttggctaccagattgaagacaacgtcatggaattatctcttgagtgg
gctgatatcattgacatcaattctcaaccagttcattccggattggttcacatatctaac
ttttatcaggttttgaatcattcatgcgtggaagagtatcatcaacgtactcagcaacac
cagaaccactccaatgtcatgacgctcgacgactgcattgcatccttcattcggcctgag
tggttggattccgagaacaaacggtcgcgttatggagacttccaaacgttctcgtaa

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