KEGG   Thalassiosira pseudonana: THAPSDRAFT_25187
Entry
THAPSDRAFT_25187  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K04728  serine-protein kinase ATM [EC:2.7.11.1]
Organism
tps  Thalassiosira pseudonana
Pathway
tps03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    THAPSDRAFT_25187
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:tps01001]
    THAPSDRAFT_25187
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tps03032]
    THAPSDRAFT_25187
   03036 Chromosome and associated proteins [BR:tps03036]
    THAPSDRAFT_25187
   03400 DNA repair and recombination proteins [BR:tps03400]
    THAPSDRAFT_25187
Enzymes [BR:tps01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     THAPSDRAFT_25187
Protein kinases [BR:tps01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   THAPSDRAFT_25187
DNA replication proteins [BR:tps03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    THAPSDRAFT_25187
Chromosome and associated proteins [BR:tps03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    THAPSDRAFT_25187
DNA repair and recombination proteins [BR:tps03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    THAPSDRAFT_25187
SSDB
Motif
Pfam: PI3_PI4_kinase FATC
Other DBs
NCBI-GeneID: 7442579
NCBI-ProteinID: XP_002296872
JGI: 25187
UniProt: B8LCV4
Position
16
AA seq 343 aa
MQQVFGTVNDLLRNEDSIGGDFIHKSVGASFIKDSSRQLRLITYGITPLSPVSGVLEWVD
NTMGFGEFMQDKGKKVGASSKYFPGEWGNSACHAFYKDNFDSSHEHRREVFDIICKNRSP
VFRFFFLEYFSTSMEAWHTARTLYTKSCAVNSIVGHILGIGDRHTQNLLVHTKTGEMVQI
DFGIVFEQGTTLTTPETVPFRLTRDVVDGMGPSGTEGVFSKSAEATMSVLRTNADTLLTI
LSAVVSDPLYKWNITPAKARQCQRNEDDARVEVPGNWESSVVDENRNDAADRAIAKIHEK
LQGYEDGTSGEHKTVAGQVKLLINEARDPDNLCEIYHGWAPWI
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgcaacaggtattcggaacagtgaacgatttgttgagaaacgaagattcaattggaggc
gactttatccacaaatccgttggtgcttctttcataaaagattcatcgcgacaattgaga
ttgatcacctacggcattactccgttaagccccgttagtggtgtccttgagtgggtagac
aatacaatgggctttggagaatttatgcaggacaaaggaaagaaggtcggtgcaagcagt
aaatacttccctggcgagtgggggaattcagcttgccatgctttctataaagacaacttt
gattcaagccatgaacatcggcgtgaggtatttgatatcatttgcaagaatagatcacca
gtattccgttttttcttccttgaatacttttcaacgtcgatggaggcttggcacaccgct
cgaacgttgtacacaaaatcttgtgcagtgaacagcattgttggacacattcttggtatc
ggagatcgccatactcaaaatctattggtgcataccaagactggtgaaatggtacagatt
gattttggcattgtgtttgagcaagggacgaccttgactacacctgaaacagttcctttc
agactcactcgcgatgtcgtcgatggcatggggccttcgggcacagaaggagtcttctcc
aagtcagcagaagccaccatgagcgttctccggacgaatgcagataccctactgactatt
ctatcagctgtcgtttccgacccattgtacaaatggaacatcactccggcaaaggcacgt
cagtgtcaacgaaacgaagacgacgcacgagtagaggtgcctggaaactgggagtcatcg
gtcgtagacgagaacaggaatgatgcagcagacagagccattgcaaagatacacgagaag
cttcaaggatacgaagatggcacatctggagaacacaaaactgttgcgggacaagtcaaa
ctgctgattaatgaggcacgcgatccagacaatctatgcgaaatataccacggatgggct
ccatggatatag

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (81)   
   KEGG ORTHOLOGY (1)   
   RefGene (76)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (95)   

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