KEGG   Thalassiosira pseudonana: THAPSDRAFT_25960
Entry
THAPSDRAFT_25960  CDS       T01078                                 
Name
(RefSeq) phenylalanyl-trna synthetase
  KO
K01889  phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Organism
tps  Thalassiosira pseudonana
Pathway
tps00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    THAPSDRAFT_25960
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:tps01007]
    THAPSDRAFT_25960
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tps03016]
    THAPSDRAFT_25960
Enzymes [BR:tps01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     THAPSDRAFT_25960
Amino acid related enzymes [BR:tps01007]
 Aminoacyl-tRNA synthetase
  Class II (U)
   THAPSDRAFT_25960
Transfer RNA biogenesis [BR:tps03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    THAPSDRAFT_25960
 Prokaryotic type
    THAPSDRAFT_25960
SSDB
Motif
Pfam: tRNA-synt_2d PheRS_DBD3 tRNA-synt_2 PheRS_DBD1 tRNA_synthFbeta tRNA-synt_2b PheRS_DBD2
Other DBs
NCBI-GeneID: 7447265
NCBI-ProteinID: XP_002290513
JGI: 25960
UniProt: B8C1R3
Position
5:complement(191446..193335)
AA seq 506 aa
MDAETAILTALSTSPDASIPDTLVFAEAHSLSHNTIVGTSKSLSTDAYISLSELSSQFYT
LTTEAESILANGSQECIVIAALIAAGEDGLSMTDLQNGVGKDVCKIGMGNCLKNKWARKE
KDGRLVAQVEGVEDEVKVLLGKLKEGGGGADVLDDKAIAILKRRKLITLVTRKSYTIIRG
PSYAPQRVKKAADLTKELLDSGKWKDTPFKEYNFATLGESVGGGYLHPLLKVRAEFRKIL
MEMGFHEMPTNKWVESSFWNFDSLFQPQSHPARDAHDTFFIKEPAQTVSVPEEYYERVKT
MHEVGGSGSIGYRYDFKREEAFKNLLRTHTTAISSQMLYKLANQEGGFKPARYFSIDRVF
RNETMDATHLCEFHQVEGLVADYNLSLGDLIGTIETFFRKIGITKLRFKPAFNPYTEPSM
EIFGYHPDLKKWTEIGNSGMFRPEMLAPMGLPENVRVIAWGLSLERPTMIKYRIDNIRNL
FGHKVDMGMTKNAPVCRFDEAEEEAQ
NT seq 1521 nt   +upstreamnt  +downstreamnt
atggacgccgaaacagccatcctaaccgccctctccacctcccccgacgccagcatcccc
gacacactcgtcttcgccgaagctcactctctctcccacaacaccatcgtcggcacctcc
aaatctctctccaccgacgcctacatctccctctcggaactctcctctcaattctacaca
ctcacaaccgaagcggagtctatcctcgccaatggatctcaagagtgcatcgtcatcgct
gccctcatcgctgcgggagaggatggactgagcatgacagatttgcaaaatggagtgggg
aaggatgtttgtaagattggcatgggcaattgtttgaagaataagtgggcgaggaaggag
aaggatgggaggttggttgcgcaggtggagggtgtggaggatgaggtgaaggtcttgttg
gggaagttgaaggaggggggtggcggggctgatgttttggatgacaaggcaattgcaatc
ctcaaacgtcgtaaactaattaccctcgtcacccgcaaatcctacaccatcatccgtggt
ccatcctacgcaccccaacgagtcaaaaaagccgctgaccttaccaaagaactactcgac
tcgggcaaatggaaggacacccccttcaaggaatacaactttgcaaccctcggagagagt
gtgggaggcggatacctccatccattgctcaaggttcgtgccgaattccgaaagatttta
atggagatgggatttcatgaaatgcccacgaacaagtgggtagagagttctttttggaac
tttgattctctctttcagccacagagtcatcctgcacgagatgctcacgataccttcttt
attaaagagcctgcgcagactgtgagtgttccagaggagtactacgaacgagtcaagacg
atgcacgaggtgggaggcagtggtagtattggataccgatatgacttcaagagagaggag
gcattcaaaaacttgttgaggacacataccaccgccatttcatcgcagatgctgtacaaa
cttgccaatcaggaaggagggttcaaaccagcacgttacttctcgattgaccgtgtcttt
cgtaatgagactatggatgcgacgcacttgtgtgagtttcatcaggtggagggactggtg
gccgattacaacttgagccttggtgatttgattggtactatcgagacgttctttcgcaag
attggtattaccaagttgcgtttcaagccggcgttcaacccatacaccgagccatcgatg
gaaatctttggatatcatcctgatttgaagaagtggactgagattggaaactctggaatg
ttccgaccggagatgttggctcccatgggtttgcctgaaaatgtacgtgtgattgcatgg
ggtttgtcattggagagacctacgatgatcaagtatcgcattgacaatattaggaatttg
ttcgggcataaggtggatatgggcatgacgaagaatgctcctgtttgtaggttcgatgag
gccgaggaggaggctcagtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (227)   
   KEGG ORTHOLOGY (1)   
   RefGene (222)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (251)   

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