KEGG   Thalassiosira pseudonana: THAPSDRAFT_32176
Entry
THAPSDRAFT_32176  CDS       T01078                                 
Name
(RefSeq) microtubule-associated protein
  KO
K08341  GABA(A) receptor-associated protein
Organism
tps  Thalassiosira pseudonana
Pathway
tps04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:tps00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    THAPSDRAFT_32176
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tps04131]
    THAPSDRAFT_32176
   04121 Ubiquitin system [BR:tps04121]
    THAPSDRAFT_32176
   03029 Mitochondrial biogenesis [BR:tps03029]
    THAPSDRAFT_32176
Membrane trafficking [BR:tps04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    THAPSDRAFT_32176
Ubiquitin system [BR:tps04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   THAPSDRAFT_32176
Mitochondrial biogenesis [BR:tps03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    THAPSDRAFT_32176
SSDB
Motif
Pfam: ATG8 APG12
Other DBs
NCBI-GeneID: 7448632
NCBI-ProteinID: XP_002287173
JGI: 32176
UniProt: B8BTK4
Position
2:340862..341819
AA seq 125 aa
MSKSFKEEHPLEKRKSEAERIRAKYPDRVPVICEKADRSDIPDIDKKKYLVPADLTVGQF
HYVIRKRIQLAPEKALFLFCSNTIPPNAALMSTVYEEQKDEDGFLYVQYSGESTFGGEEL
ELVEE
NT seq 378 nt   +upstreamnt  +downstreamnt
atgagcaagtcgttcaaagaggagcacccgctcgagaagagaaagtcagaagcagaacgc
atccgtgcaaagtatccagatagggttcccgtgatttgcgaaaaagccgatcgatctgac
attccagacattgacaagaagaagtacctcgtgcctgctgatttgacagtcggacagttt
cactatgtgattagaaagaggattcagcttgctccggagaaggctttgtttttgttttgc
tccaacacaatccctcccaatgctgctctcatgtcaactgtgtacgaagaacaaaaggac
gaggatggtttcttgtatgttcaatacagtggggagtctacgtttggaggggaagaactt
gagcttgtagaagagtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (290)   
   KEGG ORTHOLOGY (1)   
   RefGene (285)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (301)   

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