KEGG   Thalassiosira pseudonana: THAPSDRAFT_36322
Entry
THAPSDRAFT_36322  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K15331  tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
Organism
tps  Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tps03016]
    THAPSDRAFT_36322
Enzymes [BR:tps01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     THAPSDRAFT_36322
Transfer RNA biogenesis [BR:tps03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    THAPSDRAFT_36322
SSDB
Motif
Pfam: tRNA_U5-meth_tr Cons_hypoth95 Methyltransf_31 Methyltransf_25 PrmA Methyltransf_15 MTS Methyltransf_11 Ubie_methyltran Methyltransf_32
Other DBs
NCBI-GeneID: 7447016
NCBI-ProteinID: XP_002292775
JGI: 36322
UniProt: B8C918
Position
10:complement(184197..189552)
AA seq 387 aa
KWVIFIPNVIPGEVCRVRIYRNHASYSDADLLEIVQPSPDRIEPLCSLANICGGCQYQHI
NIGRQRQMKTEQVQELFERIGGLKAEDFPTVLDTLGTEEVFGYRSKITPHYDVITNKSCE
IGPIGFKEKASRRLVDVPYCHIATPDINTALSKVREETRDKAVQGKLKKPAKGATLLLRD
AGDGLVETNHVAYVNTTVKDLTFRFQAGNFFQNNPFMLPKMVDLVVDAATIKSSSGEAMT
HLIDCYCGSGLFALGCSSSFDVCVGIEVNDKAVQEARANAELNGIKNCDFVSASAEAIFL
SKDPVKGKESTVVVVDPPRKGCSEEFLEQLDEYKPQRVVYMSCDPATQARDAKFLVAHGY
DIVSVQPFDLFPQTRHIECLAIFERNY
NT seq 1164 nt   +upstreamnt  +downstreamnt
aaatgggtgatattcattccaaacgtcattccgggagaagtgtgtcgagtaagaatctat
cgtaaccacgcctcctattcagacgctgatctgcttgaaattgtacaaccgagtccagat
cgtattgagccactatgttcattggcaaacatttgtggaggatgtcagtatcaacacatt
aacattgggagacagcggcagatgaagacggagcaggtacaagaactgtttgaacggatt
gggggattgaaggcagaggattttccgacagtgttagatacgttgggaacagaagaggtg
tttggctataggtcaaaaattactcctcactacgatgtaataacaaacaaatcttgcgag
attgggcccattggtttcaaagaaaaggcatctcgtcgactagtagacgttccgtactgc
cacattgctactccagatattaacaccgcattgtcaaaagtgcgagaggagacacgtgat
aaggcagtgcaaggcaagctgaagaaaccagctaaaggagccaccttgctattgagggat
gcgggtgacgggttagtcgagacaaatcatgtagcgtatgtcaacacaactgtgaaagat
ttgacgtttcggttccaagctggtaacttcttccagaacaatccgttcatgcttccaaaa
atggttgacttggttgttgatgcggcaactatcaagtcatcctctggcgaggcaatgaca
cacttgattgactgctactgtggctccggtctatttgcattgggatgctcgtcttccttt
gacgtatgtgtcggtattgaggtcaatgacaaggcagttcaagaagcacgtgccaatgct
gagctgaatggcatcaaaaactgtgacttcgtgagtgcatccgcagaggcgatattcttg
agcaaagatccagtcaaggggaaagaatccacggtcgtcgtggtagatccgccgcgtaag
gggtgttcagaagaattcctagaacaactcgatgagtataaaccacaacgagtagtctac
atgtcttgtgatcctgcaacacaagccagagatgcaaagttcttggtagctcatgggtat
gatattgtgagtgttcaaccatttgatttgttcccccagacaaggcacatcgagtgtctt
gctatatttgagaggaattattag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (71)   
   KEGG ORTHOLOGY (1)   
   RefGene (66)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (89)   

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