KEGG   Thalassiosira pseudonana: THAPSDRAFT_36502Help
Entry
THAPSDRAFT_36502  CDS       T01078                                 

Definition
(RefSeq) predicted protein
  KO
K03259  translation initiation factor 4E
Organism
tps  Thalassiosira pseudonana
Pathway
tps03013  RNA transport
Module
tps_M00428  eIF4F complex
Brite
KEGG Orthology (KO) [BR:tps00001]
 Genetic Information Processing
  Translation
   03013 RNA transport
    THAPSDRAFT_36502
Messenger RNA biogenesis [BR:tps03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     THAPSDRAFT_36502
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     THAPSDRAFT_36502
Translation factors [BR:tps03012]
 Eukaryotic Type
  Initiation factors
   eIF-4
    THAPSDRAFT_36502
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: IF4E PMBR
Motif
Other DBs
NCBI-GeneID: 7447034
NCBI-ProteinID: XP_002292795
JGI: 36502
UniProt: B8C956
Position
10
AA seq 133 aa AA seqDB search
EEFWSVYNYIVRPDELPATTDYHFFREGIQPTWEDPQNEHGGKWVIRLPKKGNVASRFWE
EILLALMGGQFSGVPDGEVCGAVISIRDRVNVLSIWTKSGGNQKMINRVGDSIKRTLRLP
NHVSMYYHTHPRS
NT seq 402 nt NT seq  +upstreamnt  +downstreamnt
gaagaattctggtcggtctacaattacatcgtgcgcccggatgaactcccagctactacc
gattaccacttctttcgtgaggggattcagcctacctgggaagaccctcagaacgaacac
gggggcaagtgggtgattcgtcttcccaaaaagggaaatgtggcatctcgcttttgggag
gagatactgctagcgttgatgggtggacagttcagtggtgtgcctgatggagaagtttgt
ggagctgtgatttctatcagggaccgtgtgaatgtgttgagcatttggacaaagtctggg
ggtaatcaaaagatgatcaaccgggtgggagattctatcaagcggacgttgaggttaccg
aatcacgtatcaatgtactaccatacacatccaagatcataa

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