KEGG   Thalassiosira pseudonana: THAPSDRAFT_39802
Entry
THAPSDRAFT_39802  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K11843  ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12]
Organism
tps  Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:tps01002]
    THAPSDRAFT_39802
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tps04121]
    THAPSDRAFT_39802
Enzymes [BR:tps01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     THAPSDRAFT_39802
Peptidases and inhibitors [BR:tps01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   THAPSDRAFT_39802
Ubiquitin system [BR:tps04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    THAPSDRAFT_39802
SSDB
Motif
Pfam: UCH UCH_1 ubiquitin UIM
Other DBs
NCBI-GeneID: 7441751
NCBI-ProteinID: XP_002288201
JGI: 39802
UniProt: B8BX32
Position
3:359558..361261
AA seq 528 aa
MPTYATSVKWGKETITLDLDPTANTAGLKSTLQSLTGVPVDRMKLMPKSKGLWKGVLKDD
FDLSSIDLSTIGEPIQMLLMGSATLPVEPVKKTVFLEDLPPEEAAKMVEPSGLVNLGNTC
YLNSVLQCLRVIPHLRDGLKRYTPSHNSNNAQQQVHSLLLTSLLSTLTTLDKSPTAISPN
NLVMATKMAFPQMAQTGPQGQPMQQDAEEFYSSVLGVCAGELRGENVIKAAFQGGDGPTV
EELNGANNVIDAVFGLKMEETLTCDEFADALQLVEPPVTTYDLHRKLVCNIQGGSDSNSQ
TNVTHIAEGIQLALTGKLEKHSEALGRNAQWTRSQKIARLPPYLVVQFGRFYWKATPDSQ
DHSGVKCKVMKPVGFQSVLDVYEFCSDKVKSVLKVARDKAAKEEEDRVAKKLKGEDVDVA
DVAMEEEEELQAALAMSVETEQPPVGPGLPHDFQGLYELFAVVTHKGRDADGGHYMGWVK
ADNSDPHNDDWFVFDDDEVSPCKTEDILKLKGGGDWHMSYLNFYRAKK
NT seq 1587 nt   +upstreamnt  +downstreamnt
atgcccacctacgcgacctccgtcaaatggggcaaagaaaccatcaccctcgacctggac
ccaaccgccaacaccgccggcctcaaatccaccctgcaatctctcaccggagttcccgtc
gatcgcatgaagctcatgccaaagtccaaaggtctctggaagggagtgctcaaagacgac
tttgacctgagcagcatcgacttgagcaccattggagaacccattcaaatgctcctcatg
ggatcggcaacgttgcccgtagaacccgtcaagaagaccgtctttttggaggatctgccg
cccgaggaggctgccaagatggtggagccgagcggattggtcaaccttggcaacacgtgt
tatttgaacagtgtgcttcagtgtcttcgtgtcattccacatttacgggatggattgaag
cggtacacgcccagccacaacagcaacaacgcacaacaacaagtccactctcttctccta
acctccctcctctccacactcaccacacttgacaaatcccccacggcaatctcacccaac
aatctcgtcatggctaccaaaatggcattcccgcaaatggcacagaccggcccgcaggga
cagccgatgcagcaggatgccgaggagttttactcgtctgtcttgggtgtttgtgcgggg
gagttacgaggggagaatgtgatcaaggctgcatttcagggtggtgatggtcctacggtg
gaggagttgaatggggcgaataatgtgattgatgcagtgtttggattgaagatggaggag
acgttgacgtgcgatgaatttgccgatgcactgcaactcgtggaacctcccgtgacaacg
tacgatcttcacagaaagttggtctgcaacatccaaggaggatccgacagcaactctcaa
accaatgtcactcacatcgccgagggaatccaactagcactcactggcaaactcgaaaaa
cactcagaggcactcggaaggaatgcacaatggacgcgttctcaaaagattgcccgcctt
ccaccctatctcgttgtgcaatttggtcgtttttactggaaggcgacgccagactcgcaa
gatcattcgggtgtcaagtgcaaagtaatgaaacctgttggatttcagagtgtgttggat
gtgtatgagttttgcagtgataaggtgaagagtgtgttgaaggtggcgagggataaggct
gccaaggaggaggaagatcgtgttgccaagaagttgaagggggaggacgtggatgttgct
gatgttgcaatggaggaggaggaggagttgcaggcggctcttgctatgagtgtggagact
gaacaaccacccgttggacctggtcttcctcatgactttcagggattgtacgagttgttt
gcagtcgtcactcacaagggacgcgatgctgacggaggtcactacatgggatgggtaaag
gctgacaactctgaccctcacaatgatgattggttcgtctttgatgatgatgaagtgagt
ccttgtaagacggaggatattttgaagttgaagggtggtggggattggcacatgagttac
ctcaatttctaccgggccaagaagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (260)   
   KEGG ORTHOLOGY (1)   
   RefGene (255)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (273)   

Download RDF
DBGET integrated database retrieval system