KEGG   Thermotoga petrophila RKU-1: Tpet_1649
Entry
Tpet_1649         CDS       T00525                                 
Name
(GenBank) RNA methyltransferase, TrmA family
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
tpt  Thermotoga petrophila RKU-1
Brite
KEGG Orthology (KO) [BR:tpt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tpt03009]
    Tpet_1649
Enzymes [BR:tpt01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     Tpet_1649
Ribosome biogenesis [BR:tpt03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Tpet_1649
SSDB
Motif
Pfam: tRNA_U5-meth_tr Met_10 Cons_hypoth95 RrnaAD MTS TRAM Methyltransf_15 Methyltransf_31 Methyltr_RsmB-F PrmA Methyltransf_25 DOT1
Other DBs
NCBI-ProteinID: ABQ47654
UniProt: A5IN81
Position
complement(1644348..1645667)
AA seq 439 aa
MLEQVKIQKMVNGGYGLAHLSNGKVVLVEGAYPGEEVLIKTYREKRDFSFGRVVSLLKES
EDRTKPPCRYFGRCGGCHWMDVKYETQLRYKKEVLLDLFERSNLKAEVEDVEPSDLVFHY
RTKMEFHFQGRKLGLKKRDSDFVIDIKDCEVAPEGTGEILNTVKEAVQVLNVPVYNWETK
KGVLKHLVIRYAFSTDQFMVIFVTKTESFPWEKDLVRAVLKRFPKIHSIIHVMNSKDSVV
LRGPYRTLYGEGVIVEEFDWERFQIPPTAFFQSNYSVTSKLIDHVYRELALQGNEVLLDL
YAGIGTFSVRASFSAARVISVESSRVAVKAGKANANINSRRNIEYVEQDVLDFLKNYSGR
ADRIILDPPRSGAGPEVVKEIVRLSPERIVYVSCEPSTLARDLKVLVENGYSILRVKPFD
MFPQTYHVETAVTLVKGDR
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgctggagcaggtgaagatacaaaaaatggtcaacggaggctacggccttgcccatctt
tcgaacggcaaggtggttctcgtcgaaggagcgtatcccggtgaggaagttctgataaag
acttacagagagaaaagggatttttcttttggaagggtagtttcccttctgaaagaatct
gaagatcgaacgaaaccaccctgcaggtacttcggaagatgcggtggctgtcactggatg
gatgtgaaatatgaaacccagctccgatacaaaaaggaggtattgcttgatcttttcgaa
cgctcaaatctaaaggcagaagtggaagatgtggaaccgagtgaccttgtttttcattac
aggacgaaaatggagtttcatttccagggaagaaaattagggttgaaaaagagagactcc
gattttgtgatcgatataaaagactgtgaagtggcaccggaaggcacgggtgagattctg
aacaccgtcaaagaggccgttcaagtactcaacgttcctgtttacaactgggaaacgaaa
aagggagtactcaagcacctcgtgatcaggtacgcattcagcacggaccagttcatggtg
attttcgtgacgaagacagaatcctttccctgggaaaaggatctggttcgagctgtgttg
aagagatttccaaagatccactccatcatccatgtgatgaattcgaaagactctgtggtt
ctgaggggaccgtacagaaccctctatggtgagggtgtaattgtagaagagttcgactgg
gagaggtttcaaattccaccgaccgccttctttcagagtaactactccgtcacatccaaa
ctgatagatcatgtgtacagggaactggcacttcagggtaacgaagtattgctcgatctg
tacgcgggtattggaacgttttctgtgagggcttccttctcagcagcgagggtgatctct
gttgaatccagcagggtcgctgtgaaggctggaaaggctaacgcgaacataaacagcaga
aggaacatagaatacgtggaacaggatgtactggatttcctgaaaaactacagcggaagg
gcagacagaataatcctggacccaccgagatcaggtgcgggtccagaagtggtgaaagaa
atagtgagactttcacccgaaaggatcgtttacgtttcctgtgagccttccactctggcg
agggatctcaaggtgttggtggagaacggctactctattctcagggtgaagcccttcgac
atgtttccccagacttaccatgtggaaactgctgtgactctcgtgaaaggggatcgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system