KEGG   Treponema pallidum subsp. pallidum Nichols: TPANIC_0002
Entry
TPANIC_0002       CDS       T02709                                 
Symbol
dnaN
Name
(GenBank) DNA-directed DNA polymerase III beta subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
tpw  Treponema pallidum subsp. pallidum Nichols
Pathway
tpw03030  DNA replication
tpw03430  Mismatch repair
tpw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tpw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TPANIC_0002 (dnaN)
   03430 Mismatch repair
    TPANIC_0002 (dnaN)
   03440 Homologous recombination
    TPANIC_0002 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpw03032]
    TPANIC_0002 (dnaN)
   03400 DNA repair and recombination proteins [BR:tpw03400]
    TPANIC_0002 (dnaN)
Enzymes [BR:tpw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TPANIC_0002 (dnaN)
DNA replication proteins [BR:tpw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     TPANIC_0002 (dnaN)
DNA repair and recombination proteins [BR:tpw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     TPANIC_0002 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta_3 DNA_pol3_beta DNA_pol3_beta_2
Other DBs
NCBI-ProteinID: AGN75229
Position
1641..2756
AA seq 371 aa
MKILCEKEAFLKEISTAQEVISNKKNTSIFSNVLLAAQGALLTIRATDTKVTFETSIPVN
VLAEGTTTVFCDKLVNVVSALPTKEIELTLCEEQLVITPPNKKISFQLRTLSHESFPCFP
QNEGGVSLAVPTSDLRNMINHTVFAVSEDSTRHFINGVHVDFQYGNIICVSTDGKRLAYI
EKKGESSPQSFSGVIVPTKILGIVNRKLTPEGSVTLCITSQHVYFFFGGYKFSSVLIEGQ
FPNYKRVIPDHQERSFCVGRVELMEALKRVSLLVEQKSHRIFITIQQGLLTLSSKAHTQE
NEIGDAQEEIACAYTGESEVIALNYLYLEEPLKVFTSKEVQVEFTDPAKALTLRAVPNTD
CFHIIMPMQTE
NT seq 1116 nt   +upstreamnt  +downstreamnt
gtgaaaatcctatgcgagaaagaagcctttctgaaggaaataagcacagcacaagaggtt
atttcaaataaaaaaaacacgtctattttttcgaacgtcctattagctgctcaaggagcc
ctgcttaccatcagagcaaccgacacaaaagttacctttgaaactagcattcccgtcaat
gttctcgccgaaggcacaacgacagttttttgcgacaaacttgtgaatgttgtttctgcc
cttccaacaaaagaaatcgaattaacgttatgtgaagaacaacttgtcattacccctcca
aacaaaaagataagctttcagctcagaaccctctcgcatgagagttttccatgtttccct
caaaatgaaggaggcgtctctcttgctgtgcctacctccgatcttagaaacatgattaac
cataccgtttttgcagtttcagaagacagtacgcgccattttatcaatggcgtacacgtt
gattttcagtatggaaatattatttgtgtttcaacagatggaaagcggctcgcctatata
gaaaaaaagggagaatcctctccccaatccttttcgggtgttattgtgccaactaagatc
ttaggcatagtaaaccgtaagcttacccctgaaggatcagtgacgctatgcattacgtcg
cagcacgtttacttttttttcggtggatataagttttcttctgtgcttattgaggggcaa
tttcctaattacaaaagagtaatccctgatcatcaggagcgttctttttgtgttggacgt
gtggagctaatggaggcacttaaacgagtctcgttgttggtagaacaaaaatctcacagg
atatttattaccatacagcagggtttgttgactttaagctcaaaagctcacactcaagaa
aatgaaataggtgatgctcaggaagaaatagcctgtgcttatacaggagaaagtgaggtc
atagctcttaactatctataccttgaagaaccgcttaaggtttttacttcgaaggaggtt
caagtggaatttaccgatcctgcaaaagcactcacgcttcgtgctgtaccaaacacggac
tgctttcacatcattatgcctatgcaaacggagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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