KEGG   Turneriella parva: Turpa_2580
Entry
Turpa_2580        CDS       T02157                                 
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
tpx  Turneriella parva
Pathway
tpx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tpx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Turpa_2580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpx03400]
    Turpa_2580
Enzymes [BR:tpx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Turpa_2580
DNA repair and recombination proteins [BR:tpx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Turpa_2580
    RecFOR pathway proteins
     Turpa_2580
SSDB
Motif
Pfam: RuvB_N RuvB_C AAA AAA_lid_4 AAA_5 AAA_16 AAA_3 AAA_22 nSTAND3 Mg_chelatase DUF815 AAA_14 bpMoxR Sigma54_activat Rad17 NACHT RNA_helicase Sigma54_activ_2 TsaE NB-ARC NTPase_1 AAA_19 IstB_IS21 TIP49 AAA_18 MCM AAA_28 AAA_33 ABC_tran AAA_17 Zeta_toxin
Other DBs
NCBI-ProteinID: AFM13220
UniProt: I4B7G3
Position
2649751..2650773
AA seq 340 aa
MAPPIEPHLNLEKDDRELQVRPARLTDFVGQRDIAENLSAYLKAALVRREPLDHVLLSGP
PGLGKTTLARIIANEAGARFSQITAPNIKRPGDLAKILSALGENDVLFIDEIHRLPAPAE
ELLYGAMEDRTIDIAVGDGTLANSVQITLPPFTLVGATTRPGDLTAPLRDRFGIRFHLEF
YQDEDIITILSRAADIWKISMTAESRASVSRRARSTPRIALHLLRRVWDYALAESGDLSH
EIDRGAAEFAFGKMQIDAEGMTRLDRQLMLSIANHYQGGPVGLKPLSAILAEDLTTLEDY
VEPYLVRRGFIRRTPRGRMLTPEAYKHLGLSGGPQGLFEP
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggcgccgccgattgaaccgcacctcaatctcgaaaaagacgaccgcgaactgcaggtt
cgcccggcacggctcaccgactttgtcggccagcgcgacatcgcagaaaatctatctgcc
taccttaaggccgcgctggtgcgccgcgaaccgcttgaccatgttctgctttcggggccg
ccggggctcggcaagaccacgcttgcgcgcatcatcgccaatgaggctggggcgcgcttt
tcgcagataacggcgcccaatatcaagcggcccggtgatcttgcgaaaattctgagcgcg
ctaggcgagaacgatgtgctcttcatcgacgagattcacagattgcccgcgcctgccgaa
gaactcctttatggcgcaatggaagaccgcacgatcgacatcgctgtcggcgacggtacg
ctcgccaattcggtgcagattaccctgcctccgtttacgctcgtgggggcgacgacaaga
cccggtgacctgacggcgccgctgcgcgatcgttttggtattcgctttcatcttgaattc
tatcaagatgaggatatcataactattctctcgcgcgcggccgacatctggaaaatcagc
atgacggcagagtcgcgcgcttcggtgagccgcagggcgcgcagtacgccccgtatcgca
ttgcaccttctgcgccgcgtctgggattacgcgcttgccgagagcggtgacctgagtcac
gaaatcgatcgcggcgcagctgaattcgcgtttggcaaaatgcagatcgatgcagaaggt
atgacgcgcctcgacaggcagcttatgctgagcatagcgaaccactaccagggtgggccc
gtcggtctcaaacccctgtcagcgattctggccgaagatcttaccacgctagaagattac
gttgaaccgtatctcgtgcgccggggatttatacgccgcacaccgcgcggcagaatgctt
acccctgaggcttataaacacctcggcctcagtggcgggccgcagggcctgttcgaaccc
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (31)   
   Pfam (31)   
All databases (45)   

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