KEGG   Turneriella parva: Turpa_3948
Entry
Turpa_3948        CDS       T02157                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
tpx  Turneriella parva
Brite
KEGG Orthology (KO) [BR:tpx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tpx03009]
    Turpa_3948
Enzymes [BR:tpx01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     Turpa_3948
Ribosome biogenesis [BR:tpx03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Turpa_3948
SSDB
Motif
Pfam: PseudoU_synth_2 S4 DUF1062
Other DBs
NCBI-ProteinID: AFM14582
UniProt: I4BBC5
Position
complement(4128471..4129457)
AA seq 328 aa
MALNKAATEQILHLELPAGVRLDKFLAAELGEGNQGLSRSQLQRLIEQGQITGISEKNLK
SSFKAKRATAITITLPPEKPAEILPFAASIPVLYEDEYLAIVHKPAGMTVHPGAATGNDT
LVHALVGQIKKLAPHAERPGIVHRLDRETEGLMVIAKTDKARAALAGLFADRQVHKTYQA
IVWGSVELPEKIDGFIWRDRRNRKKMKFGYEAPEKGIRAREAQLVFLRQTRYKFGTELEI
NLITGRTHQIRATCAQLNAPIIGDAIYGDDAGRAKTYKVGREKRDDLSACGMLLVAKSIE
FAHPFKRKKIKFAIELPARFAEARSLLK
NT seq 987 nt   +upstreamnt  +downstreamnt
ttggcgttgaataaagccgcaacagaacagattttgcatctcgagctgcccgctggcgtg
cggcttgataaatttctcgcggccgagctgggcgagggcaatcagggcctttcgcgctct
cagttacagcgcctcattgaacaggggcaaattacgggcatcagcgaaaagaatctcaaa
tcgtcgtttaaggcaaagcgcgcaaccgcgattacgattactctgccgccagagaagccg
gctgagattttgccgttcgcggcgtcgattcccgtgctgtacgaagatgaatatctggcg
attgtgcacaaacccgcaggcatgaccgtgcacccgggggcggcaacgggtaacgacact
ctcgtgcacgcgctcgtcggccagatcaagaagctggcaccgcatgccgagcggcccggc
atcgtgcaccgcctcgaccgggaaaccgaaggcctcatggtgatcgccaagaccgacaag
gcgcgcgcggcgctcgccgggctatttgccgatcgacaggtgcacaagacctatcaggca
attgtctggggcagcgttgaactgccagaaaagatcgacggatttatctggcgagaccgc
cgaaaccgtaagaaaatgaagtttggctacgaagcgcctgaaaaaggtataagagcgcgc
gaggcgcagctcgtatttctgcggcagacacgttacaaattcggcaccgagcttgagatc
aacctgattacgggcagaacgcaccagatcagggcaacctgcgcgcagctcaatgcgccg
attatcggcgacgcaatctatggagacgatgcgggccgggccaagacgtataaagtcggg
cgcgaaaagcgcgacgacctgtctgcctgtggtatgctgctggtggcgaaaagtatcgag
tttgcgcatccgtttaagcgaaagaaaatcaaattcgccattgagctgcctgcgcgtttt
gcagaagcccgctcgcttctcaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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