GenomeNet

Database: UniProt/TrEMBL
Entry: A0A088TZT9_9BURK
LinkDB: A0A088TZT9_9BURK
Original site: A0A088TZT9_9BURK 
ID   A0A088TZT9_9BURK        Unreviewed;       888 AA.
AC   A0A088TZT9;
DT   26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT   26-NOV-2014, sequence version 1.
DT   07-JUN-2017, entry version 15.
DE   SubName: Full=DNA ligase D {ECO:0000313|EMBL:AIO30538.1};
GN   Name=ligD {ECO:0000313|EMBL:AIO30538.1};
GN   ORFNames=DM39_7047 {ECO:0000313|EMBL:AIO30538.1};
OS   Burkholderia cenocepacia.
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
OX   NCBI_TaxID=95486 {ECO:0000313|EMBL:AIO30538.1, ECO:0000313|Proteomes:UP000029413};
RN   [1] {ECO:0000313|EMBL:AIO30538.1, ECO:0000313|Proteomes:UP000029413}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DDS 22E-1 {ECO:0000313|EMBL:AIO30538.1,
RC   ECO:0000313|Proteomes:UP000029413};
RA   Bishop-Lilly K.A., Broomall S.M., Chain P.S., Chertkov O., Coyne S.R.,
RA   Daligault H.E., Davenport K.W., Erkkila T., Frey K.G., Gibbons H.S.,
RA   Gu W., Jaissle J., Johnson S.L., Koroleva G.I., Ladner J.T., Lo C.-C.,
RA   Minogue T.D., Munk C., Palacios G.F., Redden C.L., Rosenzweig C.N.,
RA   Scholz M.B., Teshima H., Xu Y.;
RL   Submitted (MAY-2014) to the EMBL/GenBank/DDBJ databases.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP007782; AIO30538.1; -; Genomic_DNA.
DR   RefSeq; WP_038455783.1; NZ_CP007782.1.
DR   EnsemblBacteria; AIO30538; AIO30538; DM39_7047.
DR   KEGG; bcen:DM39_7047; -.
DR   KO; K01971; -.
DR   Proteomes; UP000029413; Chromosome 3.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000029413};
KW   Ligase {ECO:0000313|EMBL:AIO30538.1}.
FT   DOMAIN      323    408       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   888 AA;  98087 MW;  67F4D4C4C7BC45A0 CRC64;
     MADKLEPYRR MRRFDATPEP EGAHGRRRAA AGARSKPPAR GRQPLRYVIQ EHHARRLHYD
     FRLELDGTLK SWAVPKGPSV DPSVKRLAVH VEDHPLEYAS FEGEIPAGHY GAGSVVVWDE
     GTWVPDGGLA GARDGYRAGK LTFRLDGRKL HGGWALVRSG RQEGRQEQWL LIKERDDEAR
     DAEGYDVVAQ QPGSVHRRAA SRPLAPSGIE GAVRAPLPER VAPQLATLVD APPAHGDWRY
     ELKFDGYRIL ARIAGKGARR HVTLMTREGR DWTAKLRPQR DALAALGVDD AWLDAEAVVL
     GEHGLPDFQA LQNALGAGRA DAVTLFVFDL PYLDGYDLRD APLTARRALL EPLLADCDPV
     RLRFSPDLGD DVATLIANAC DTGLEGLIGK RADARYRAGR SPAWIKLKCR RRQEFVIGGY
     TEPSGARNGF GALLLGVHEP APQGTKRRDA GPLRYVGRVG TGFDTRTLDR LAAILRAHER
     DAAPFDPPPR EWSRTRVHWV EPTLVAECEF AEWTGDGIVR QAAFIALRDD KPAAQIVREV
     ARHTATEATM DERNTTDGAR DGAQHDGGAT RARTRRSTGA QSRAGTPRGE AAPDQVGRVR
     ITHPERVVDP QHGTRKIDLA HYWEWVAPWL LPDLAGRPVS LVRAPEDITG ELFFQKHADR
     REIPYVARHA GLDPGHGPLL TIDSVDALVG AAQMGTVELH TWNAHVSNIE RPDRIVFDLD
     PDPALPWRAM IDAAQLVRGL LDELGLVSFC KTSGGKGLHV VVPITRHAGW DEVKDFSRAV
     AQHVAAALPD RFTATMGPRN RRGKIFIDYL RNGRGASTIA AYSVRARPGM GVSVPIGWDE
     VPDTTGGAQW TIDTLYERLE HLARDPWEDY ANTRQRITAR MRARLATS
//
DBGET integrated database retrieval system