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Database: UniProt/TrEMBL
Entry: A0A089ZQT0_9PSED
LinkDB: A0A089ZQT0_9PSED
Original site: A0A089ZQT0_9PSED 
ID   A0A089ZQT0_9PSED        Unreviewed;       862 AA.
AC   A0A089ZQT0;
DT   26-NOV-2014, integrated into UniProtKB/TrEMBL.
DT   26-NOV-2014, sequence version 1.
DT   07-JUN-2017, entry version 15.
DE   SubName: Full=ATP-dependent DNA ligase {ECO:0000313|EMBL:AIS18166.1};
DE            EC=6.5.1.1 {ECO:0000313|EMBL:AIS18166.1};
GN   Name=ligD {ECO:0000313|EMBL:AIS18166.1};
GN   ORFNames=LT40_12535 {ECO:0000313|EMBL:AIS18166.1};
OS   Pseudomonas rhizosphaerae.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=216142 {ECO:0000313|EMBL:AIS18166.1, ECO:0000313|Proteomes:UP000029499};
RN   [1] {ECO:0000313|EMBL:AIS18166.1, ECO:0000313|Proteomes:UP000029499}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 16299 {ECO:0000313|EMBL:AIS18166.1};
RX   PubMed=25483321; DOI=10.1016/j.jbiotec.2014.11.031;
RA   Kwak Y., Jung B.K., Shin J.H.;
RT   "Complete genome sequence of Pseudomonas rhizosphaerae IH5T (=DSM
RT   16299T), a phosphate-solubilizing rhizobacterium for bacterial
RT   biofertilizer.";
RL   J. Biotechnol. 193:137-138(2015).
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DR   EMBL; CP009533; AIS18166.1; -; Genomic_DNA.
DR   RefSeq; WP_043190496.1; NZ_CP009533.1.
DR   EnsemblBacteria; AIS18166; AIS18166; LT40_12535.
DR   KEGG; prh:LT40_12535; -.
DR   KO; K01971; -.
DR   Proteomes; UP000029499; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:UniProtKB-EC.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000029499};
KW   Ligase {ECO:0000313|EMBL:AIS18166.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000029499}.
FT   DOMAIN      323    415       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   862 AA;  94806 MW;  A33BCF8CD16FFAF9 CRC64;
     MTKALEEYNR KRDFDATSEP SGTARVGKRG KATKALQFCI QKHDASHLHY DFRLELDGTL
     KSWAVPKGPS LDPQARRLAV HVEDHPLDYA SFEGNIPDGH YGAGDVIVWD RGIWIPEGDP
     RQAYEKGKLK FVLQGEKLSG TWNLVKTHMP GKREQWFLIK SKDDAARPLA EYDVLVAEPD
     SVISERTLVP RKRATKAAAK PVNKPAAKPT PKRAKGKGIQ LEGAKAADLP ATLKPELATL
     VDSAPEGDWC YEIKFDGYRI VARIDGDQVS LFTRNGHDWT AKMPRQAKAL ADLGLQSAWL
     DGEVVVANEE GVPDFQALQN AFEDERSDKI VFYLFDLPYL NGMDLRAVPL EQRRGALAKV
     LETNTEDALK FSDDLAGSAE SLLDSACQMN MEGLIGKRVG SPYVSRRSSD WIKLKCKRRQ
     EFVIAGYTEP KGSRSGFGAL LLGLHDADSG ELRFAGKVGT GFSESTLRTL LAQLQALETD
     RPALANPPKG AQARGVHWLK PTLLAEVAYA EMTRDGAVRH AVFHGLRTDK LAKEITSEMP
     AAKSSTSAKP AGKPAKKPRK AATKADDADL VGQVRITHPE RVINASSGTT KMQLAEYYGR
     ISPWLLPHLK QRPVALVRAP DGVGGELFFQ KHAGHLAIPH ILTFDKEQAG QAAMVINDGQ
     ALLGAVQMGT VELHTWNATT KDFQHPDRFV LDLDPDPALP WKSMVEATQL TQTLLDELGL
     ASFLKTSGGK GMHVVVPITR KLGWDEVKAF SRAVVEHMAK LMPERFTAVS GPKNRVGRIF
     IDYLRNGLGA TTACAYAARA RDGLPVSVPV TREEVAQIKG GDQWDIDSVL ERLAELEEDP
     WADFFSTRQS ITVAMRKKLG LK
//
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