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Database: UniProt/TrEMBL
Entry: A0A0A7PF39_9SPHN
LinkDB: A0A0A7PF39_9SPHN
Original site: A0A0A7PF39_9SPHN 
ID   A0A0A7PF39_9SPHN        Unreviewed;       349 AA.
AC   A0A0A7PF39;
DT   04-MAR-2015, integrated into UniProtKB/TrEMBL.
DT   04-MAR-2015, sequence version 1.
DT   24-JAN-2024, entry version 44.
DE   RecName: Full=alanine racemase {ECO:0000256|ARBA:ARBA00013089};
DE            EC=5.1.1.1 {ECO:0000256|ARBA:ARBA00013089};
GN   ORFNames=SKP52_08895 {ECO:0000313|EMBL:AJA08691.1};
OS   Sphingopyxis fribergensis.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingopyxis.
OX   NCBI_TaxID=1515612 {ECO:0000313|EMBL:AJA08691.1, ECO:0000313|Proteomes:UP000030907};
RN   [1] {ECO:0000313|EMBL:AJA08691.1, ECO:0000313|Proteomes:UP000030907}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Kp5.2 {ECO:0000313|EMBL:AJA08691.1,
RC   ECO:0000313|Proteomes:UP000030907};
RX   PubMed=26040579; DOI=10.1099/ijs.0.000371;
RA   Oelschlagel M., Ruckert C., Kalinowski J., Schmidt G., Schlomann M.,
RA   Tischler D.;
RT   "Description of Sphingopyxis fribergensis sp. nov. - a soil bacterium with
RT   the ability to degrade styrene and phenylacetic acid.";
RL   Int. J. Syst. Evol. Microbiol. 65:3008-3015(2015).
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=L-alanine = D-alanine; Xref=Rhea:RHEA:20249,
CC         ChEBI:CHEBI:57416, ChEBI:CHEBI:57972; EC=5.1.1.1;
CC         Evidence={ECO:0000256|ARBA:ARBA00000316};
CC   -!- COFACTOR:
CC       Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC         Evidence={ECO:0000256|ARBA:ARBA00001933,
CC         ECO:0000256|PIRSR:PIRSR600821-50};
CC   -!- SIMILARITY: Belongs to the alanine racemase family.
CC       {ECO:0000256|ARBA:ARBA00007880}.
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DR   EMBL; CP009122; AJA08691.1; -; Genomic_DNA.
DR   RefSeq; WP_039573990.1; NZ_CP009122.1.
DR   AlphaFoldDB; A0A0A7PF39; -.
DR   STRING; 1515612.SKP52_08895; -.
DR   KEGG; sphk:SKP52_08895; -.
DR   HOGENOM; CLU_028393_1_1_5; -.
DR   OrthoDB; 9813814at2; -.
DR   Proteomes; UP000030907; Chromosome.
DR   GO; GO:0008784; F:alanine racemase activity; IEA:UniProtKB-EC.
DR   GO; GO:0006522; P:alanine metabolic process; IEA:InterPro.
DR   Gene3D; 3.20.20.10; Alanine racemase; 1.
DR   InterPro; IPR000821; Ala_racemase.
DR   InterPro; IPR009006; Ala_racemase/Decarboxylase_C.
DR   InterPro; IPR011079; Ala_racemase_C.
DR   InterPro; IPR001608; Ala_racemase_N.
DR   InterPro; IPR020622; Ala_racemase_pyridoxalP-BS.
DR   InterPro; IPR029066; PLP-binding_barrel.
DR   PANTHER; PTHR30511; ALANINE RACEMASE; 1.
DR   PANTHER; PTHR30511:SF0; ALANINE RACEMASE, CATABOLIC-RELATED; 1.
DR   Pfam; PF00842; Ala_racemase_C; 1.
DR   Pfam; PF01168; Ala_racemase_N; 1.
DR   PRINTS; PR00992; ALARACEMASE.
DR   SMART; SM01005; Ala_racemase_C; 1.
DR   SUPFAM; SSF50621; Alanine racemase C-terminal domain-like; 1.
DR   SUPFAM; SSF51419; PLP-binding barrel; 1.
DR   PROSITE; PS00395; ALANINE_RACEMASE; 1.
PE   3: Inferred from homology;
KW   Isomerase {ECO:0000256|ARBA:ARBA00023235};
KW   Pyridoxal phosphate {ECO:0000256|ARBA:ARBA00022898,
KW   ECO:0000256|PIRSR:PIRSR600821-50}.
FT   DOMAIN          227..349
FT                   /note="Alanine racemase C-terminal"
FT                   /evidence="ECO:0000259|SMART:SM01005"
FT   BINDING         132
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR600821-52"
FT   BINDING         297
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR600821-52"
FT   MOD_RES         38
FT                   /note="N6-(pyridoxal phosphate)lysine"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR600821-50"
SQ   SEQUENCE   349 AA;  37312 MW;  71BC0FE5B7E5A5CE CRC64;
     MIEVPSPLRL RLDSEALVAN WRWLASQSNG AACGAAIKAD GYGLGARAVI AYLAAAGCRD
     FFVATWAEAA AAMPLPEGVS LSVLHGVGAS DMVAARTLPA RPVLNSVEQV ARWREAGEGR
     PCDVMVDTGM NRLGLRVEEA VGGALDGLSI ETLLSHLASA DEDSDQNARQ LAAFQALRQA
     IPARRYSLAN SAGVCLGGDY AFDLTRPGLA LYGGTPRSEA EGHIRQVVYP ETRVLQVRSV
     LQGEVVGYGA TWTARRDSRV AVANMGYADG FLRCHAGSCA TATWQERALP LIGRISMDLI
     AFDASDARAI EEGDWLALDY DLPSTSARCG LSQYELLTGL GRRFDRIWI
//
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