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Database: UniProt/TrEMBL
Entry: A0A0D5IYP9_9BURK
LinkDB: A0A0D5IYP9_9BURK
Original site: A0A0D5IYP9_9BURK 
ID   A0A0D5IYP9_9BURK        Unreviewed;       914 AA.
AC   A0A0D5IYP9;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   05-JUL-2017, entry version 16.
DE   SubName: Full=DNA ligase D {ECO:0000313|EMBL:AJY11568.1};
GN   Name=ligD {ECO:0000313|EMBL:AJY11568.1};
GN   ORFNames=AK34_5177 {ECO:0000313|EMBL:AJY11568.1};
OS   Burkholderia dolosa AU0158.
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
OX   NCBI_TaxID=350701 {ECO:0000313|EMBL:AJY11568.1, ECO:0000313|Proteomes:UP000032886};
RN   [1] {ECO:0000313|EMBL:AJY11568.1, ECO:0000313|Proteomes:UP000032886}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=AU0158 {ECO:0000313|EMBL:AJY11568.1,
RC   ECO:0000313|Proteomes:UP000032886};
RX   PubMed=25931592;
RA   Johnson S.L., Bishop-Lilly K.A., Ladner J.T., Daligault H.,
RA   Jaissle J., Frey K.G., Koroleva G.I., Bruce D.C., Coyne S.R.,
RA   Broomall S.M., Li P., Teshima H., Gibbons H.S., Palacios G.F.,
RA   Rosenzweig C.N., McMurry K., Redden C.L., Xu Y., Currie B., Mayo M.,
RA   Minogue T.D., Chain P.S.;
RT   "Complete genome sequences for 59 burkholderia isolates, both
RT   pathogenic and near neighbor.";
RL   Genome Announc. 3:0-0(2015).
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DR   EMBL; CP009794; AJY11568.1; -; Genomic_DNA.
DR   RefSeq; WP_035975904.1; NZ_CP009794.1.
DR   STRING; 350701.BDAG_04887; -.
DR   EnsemblBacteria; AJY11568; AJY11568; AK34_5177.
DR   KEGG; bdl:AK34_5177; -.
DR   PATRIC; fig|350701.8.peg.5796; -.
DR   KO; K01971; -.
DR   Proteomes; UP000032886; Chromosome 3.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000032886};
KW   Ligase {ECO:0000313|EMBL:AJY11568.1}.
FT   DOMAIN      323    415       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   914 AA;  101092 MW;  F7B2A0F90530CC52 CRC64;
     MADKLDLYRR KRHFDATPEP AGARGRRRTK PDAAPKDRSR AAARGSHPLR FVIQEHHARR
     LHYDFRLELD GTLKSWAIPK GPSFDPSVKR LAVHVEDHPL EYASFEGEIP AGHYGAGSVV
     VWDEGTWTPE GGLAKAREGY RAGKLKFRLD GEKLHGGWAL VRSGRQEGRQ EQWLLIKERD
     DEARSADEFD VVGERPGSVH AGDGRPPDAP LAPQDVEGAV RAPLPERVAP QLATLVDAPP
     THGDWRYEVK FDGYRMLARV SGKGARRRVT LMTREGRDWT PKLRAQRDAL AALDVDDAWF
     DGEAVVLREN GLPDFQALQN ALGAGRSDEI TLFVFDLPYL NGYDLRDAPL TARRALLEPL
     LADSDPARLR YSPDLGDDVV SLISSACDTG LEGLIGKRAD ARYRAGRSPA WIKLKCRRRQ
     EFVIGGYTEP SGSRHGLGAL LLGVHEPAPD GKRRRGPGPL RYVGRVGTGF DSRMLDRLAA
     RLRKHERDTA PFDPAPNEWS RTPVHWVEPT LVAECEFAEW TGDGIVRQAA FIALRDDKPA
     SQIVREVPRH TETETTMDDR HTEQDKPARH ARSAPRGHAS NGDARGSHSR ASARGTASTR
     GTSGTSGSGT SGTKAGSGPD QVGRVRITHP ERVIDPQHGT RKIDLAHYWQ WVAPWLLPDL
     KGRPVSLVRA PGNIEGELFF QKHADRREIP FVTRHEGLDP GHGALLSIDS VDALLGVAQM
     GTIELHTWNA HVSNIERPDR IVFDLDPDPA LPWSTMIEAA QLVRGLLDEL GLVSFCKTSG
     GKGLHVVVPL TRHAGWDDMK DFSRAVAQHV AGALPDRFTA TMGPRHRRGK IFIDYLRNGR
     GASTIAAYSV RARPGMGVSV PIGWDEVPGT TGGAQWTIDT LHERLDRLER DPWEAYAQTR
     QRVTAKMRAR LGMS
//
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