GenomeNet

Database: UniProt/TrEMBL
Entry: A0A0H3D331_AMYMU
LinkDB: A0A0H3D331_AMYMU
Original site: A0A0H3D331_AMYMU 
ID   A0A0H3D331_AMYMU        Unreviewed;       670 AA.
AC   A0A0H3D331;
DT   16-SEP-2015, integrated into UniProtKB/TrEMBL.
DT   16-SEP-2015, sequence version 1.
DT   05-JUL-2017, entry version 11.
DE   SubName: Full=ATP-dependent DNA ligase {ECO:0000313|EMBL:ADJ45045.1};
GN   Name=lig {ECO:0000313|EMBL:ADJ45045.1};
GN   OrderedLocusNames=AMED_3255 {ECO:0000313|EMBL:ADJ45045.1};
OS   Amycolatopsis mediterranei (strain U-32).
OC   Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
OC   Amycolatopsis.
OX   NCBI_TaxID=749927 {ECO:0000313|EMBL:ADJ45045.1, ECO:0000313|Proteomes:UP000000328};
RN   [1] {ECO:0000313|EMBL:ADJ45045.1, ECO:0000313|Proteomes:UP000000328}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=U-32 {ECO:0000313|Proteomes:UP000000328};
RX   PubMed=20567260; DOI=10.1038/cr.2010.87;
RA   Zhao W., Zhong Y., Yuan H., Wang J., Zheng H., Wang Y., Cen X., Xu F.,
RA   Bai J., Han X., Lu G., Zhu Y., Shao Z., Yan H., Li C., Peng N.,
RA   Zhang Z., Zhang Y., Lin W., Fan Y., Qin Z., Hu Y., Zhu B., Wang S.,
RA   Ding X., Zhao G.P.;
RT   "Complete genome sequence of the rifamycin SV-producing Amycolatopsis
RT   mediterranei U32 revealed its genetic characteristics in phylogeny and
RT   metabolism.";
RL   Cell Res. 20:1096-1108(2010).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP002000; ADJ45045.1; -; Genomic_DNA.
DR   RefSeq; WP_013225117.1; NC_014318.1.
DR   RefSeq; YP_003765447.1; NC_014318.1.
DR   ProteinModelPortal; A0A0H3D331; -.
DR   STRING; 749927.AMED_3255; -.
DR   EnsemblBacteria; ADJ45045; ADJ45045; AMED_3255.
DR   GeneID; 9437455; -.
DR   KEGG; amd:AMED_3255; -.
DR   PATRIC; fig|749927.5.peg.3360; -.
DR   KO; K01971; -.
DR   OMA; QEFVICG; -.
DR   Proteomes; UP000000328; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04863; MtLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR033649; MtLigD_Pol-like.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000000328};
KW   Ligase {ECO:0000313|EMBL:ADJ45045.1}.
FT   DOMAIN      119    251       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   670 AA;  73532 MW;  D27A67A8BFE8E1AA CRC64;
     MAADDASLVP AWLEPMLAKA DGGRLRTGPE WAYEYKLDGY RAAMRIAPDG TTVLTSRNNI
     DFTAEFTDLE GVLAPALDGR AAYLDGEIVV YGEDGRIDFE RMQERRGRYV RHQSGPKGRE
     FTDVPVRFLA FDLLRLGDES LLAMPYDERR RLLAELPMPD PYRVSVVRAV TFDELAADRR
     TPADFLAHAA SAGYEGVVAK LRSSAYHPGQ RPDSWLKHPL VRTQEVIVCG WRPGQNSFTG
     TLGGLLLGAH DPATGDLVYI GDVGTGFSQA TRADLRAQLE AMERRTHPFV TTPPREDTAR
     ARWVEPRLVG EIVYRQFTRG GRVRHTAWRG LRHDKDPAEV LAPRAVPHEP AGAAPAPPSP
     SSSASASASP SPEPAGQRIT VQAGDRRLTL SNLDKVLYPA DGFTKGEVIN YYSRVAAVLL
     PHLAGRPVTF IRYPNGVDGQ KWFEKNAPKG APDWLRTVRL AGTGGTIDYP LLDDLPGLVW
     AANMAALELH VPQWTVEQGT RQPPDRLVFD LDPGPGTTIV DCCRVAERLH DVLVADGLTP
     YAKTSGSKGM QLYCGIRTDD PAAPSAYAKR LAQRLAKETP ESVTAVMAKA QRTGRVFIDW
     SQNNPAKTTV APYSLRGRDH PTASTPVTWD EVRACRHVNR LTFTADDVLD RLEDHGDLLA
     GLIEDRAPLG
//
DBGET integrated database retrieval system