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Database: UniProt/TrEMBL
Entry: A0A0H3NCT9_SALTS
LinkDB: A0A0H3NCT9_SALTS
Original site: A0A0H3NCT9_SALTS 
ID   A0A0H3NCT9_SALTS        Unreviewed;       494 AA.
AC   A0A0H3NCT9;
DT   16-SEP-2015, integrated into UniProtKB/TrEMBL.
DT   16-SEP-2015, sequence version 1.
DT   24-JAN-2024, entry version 33.
DE   SubName: Full=Alpha-amylase {ECO:0000313|EMBL:CBW17987.1, ECO:0000313|EMBL:HAD6469916.1};
DE            EC=3.2.1.1 {ECO:0000313|EMBL:HAD6469916.1};
GN   Name=amyA {ECO:0000313|EMBL:CBW17987.1};
GN   OrderedLocusNames=SL1344_1892 {ECO:0000313|EMBL:CBW17987.1};
GN   ORFNames=G1W50_07905 {ECO:0000313|EMBL:HAD6469916.1}, G1W53_11760
GN   {ECO:0000313|EMBL:HAD6531437.1}, G1W54_12145
GN   {ECO:0000313|EMBL:HAD6475521.1}, G1W56_12650
GN   {ECO:0000313|EMBL:HAD6536478.1}, G1W63_12455
GN   {ECO:0000313|EMBL:HAD6498721.1}, G1W64_12470
GN   {ECO:0000313|EMBL:HAD6555044.1}, G1W86_11055
GN   {ECO:0000313|EMBL:HAD6645713.1}, G1W87_22255
GN   {ECO:0000313|EMBL:HAD6652650.1}, G1W89_11945
GN   {ECO:0000313|EMBL:HAD6772430.1}, G1W92_18005
GN   {ECO:0000313|EMBL:HAD6670892.1}, G1X03_12335
GN   {ECO:0000313|EMBL:HAD6720914.1}, G1X04_07245
GN   {ECO:0000313|EMBL:HAD6790199.1}, G1X09_12795
GN   {ECO:0000313|EMBL:HAD6702145.1}, G1X10_12710
GN   {ECO:0000313|EMBL:HAD6707053.1}, G1X13_12790
GN   {ECO:0000313|EMBL:HAD6801015.1}, G1X17_12800
GN   {ECO:0000313|EMBL:HAD6814981.1}, G1X23_12695
GN   {ECO:0000313|EMBL:HAD6886764.1}, G1X29_14065
GN   {ECO:0000313|EMBL:HAD7020266.1}, G1X32_11850
GN   {ECO:0000313|EMBL:HAD6819776.1}, G1X38_12155
GN   {ECO:0000313|EMBL:HAD6923618.1}, G1X42_18010
GN   {ECO:0000313|EMBL:HAD7006449.1}, G1X47_11160
GN   {ECO:0000313|EMBL:HAD6833695.1}, G1X49_12350
GN   {ECO:0000313|EMBL:HAD6848464.1}, G1X51_12795
GN   {ECO:0000313|EMBL:HAD7015210.1}, G1X52_12475
GN   {ECO:0000313|EMBL:HAD7024715.1}, G1X66_12155
GN   {ECO:0000313|EMBL:HAD6928428.1}, G1X68_11240
GN   {ECO:0000313|EMBL:HAD7069571.1}, G1X69_13065
GN   {ECO:0000313|EMBL:HAD6995903.1}, G1X71_12800
GN   {ECO:0000313|EMBL:HAD7065065.1}, G1X76_11825
GN   {ECO:0000313|EMBL:HAD7118510.1}, G1X80_11825
GN   {ECO:0000313|EMBL:HAD6947854.1}, G1X84_19610
GN   {ECO:0000313|EMBL:HAD7105267.1}, G1X85_22630
GN   {ECO:0000313|EMBL:HAD7153872.1}, G1X86_11255
GN   {ECO:0000313|EMBL:HAD7156503.1}, G1X94_11680
GN   {ECO:0000313|EMBL:HAD7137684.1}, G1X96_11260
GN   {ECO:0000313|EMBL:HAD7175207.1}, G1X99_12485
GN   {ECO:0000313|EMBL:HAD7142653.1}, G1Y02_11855
GN   {ECO:0000313|EMBL:HAD7197934.1};
OS   Salmonella typhimurium (strain SL1344).
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Salmonella.
OX   NCBI_TaxID=216597 {ECO:0000313|EMBL:CBW17987.1, ECO:0000313|Proteomes:UP000008962};
RN   [1] {ECO:0000313|EMBL:CBW17987.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=SL1344 {ECO:0000313|EMBL:CBW17987.1};
RA   Aslett M.;
RL   Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:CBW17987.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=SL1344 {ECO:0000313|EMBL:CBW17987.1};
RA   Kroger C., Dillon S.C., Cameron A.D., Papenfort K., Sivasankaran S.K.,
RA   Hokamp K., Chao Y., Sittka A., Hebrard M., Handler K., Colgan A.,
RA   Leekitcharoenphon P., Langridge G.C., Lohan A.J., Loftus B., Lucchini S.,
RA   Ussery D.W., Dorman C.J., Thomson N.R., Vogel J., Hinton J.C.D.;
RT   "The transcriptional architecture of the model pathogen Salmonella enterica
RT   serovar Typhimurium.";
RL   Proc. Natl. Acad. Sci. U.S.A. 109:e1277-e1286(2012).
RN   [3] {ECO:0000313|Proteomes:UP000008962}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=SL1344 {ECO:0000313|Proteomes:UP000008962};
RX   PubMed=22538806; DOI=10.1073/pnas.1201061109;
RA   Kroger C., Dillon S.C., Cameron A.D., Papenfort K., Sivasankaran S.K.,
RA   Hokamp K., Chao Y., Sittka A., Hebrard M., Handler K., Colgan A.,
RA   Leekitcharoenphon P., Langridge G.C., Lohan A.J., Loftus B., Lucchini S.,
RA   Ussery D.W., Dorman C.J., Thomson N.R., Vogel J., Hinton J.C.;
RT   "The transcriptional landscape and small RNAs of Salmonella enterica
RT   serovar Typhimurium.";
RL   Proc. Natl. Acad. Sci. U.S.A. 109:E1277-E1286(2012).
RN   [4] {ECO:0000313|EMBL:HAD6469916.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=SL1344 {ECO:0000313|EMBL:HAD6469916.1};
RX   PubMed=30286803;
RA   Souvorov A., Agarwala R., Lipman D.J.;
RT   "SKESA: strategic k-mer extension for scrupulous assemblies.";
RL   Genome Biol. 19:153-153(2018).
RN   [5] {ECO:0000313|EMBL:HAD6469916.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=SL1344 {ECO:0000313|EMBL:HAD6469916.1};
RG   NCBI Pathogen Detection Project;
RL   Submitted (JAN-2019) to the EMBL/GenBank/DDBJ databases.
CC   -!- COFACTOR:
CC       Name=Ca(2+); Xref=ChEBI:CHEBI:29108;
CC         Evidence={ECO:0000256|ARBA:ARBA00001913};
CC   -!- SIMILARITY: Belongs to the glycosyl hydrolase 13 family.
CC       {ECO:0000256|ARBA:ARBA00008061}.
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DR   EMBL; FQ312003; CBW17987.1; -; Genomic_DNA.
DR   EMBL; DAAPJV010000004; HAD6469916.1; -; Genomic_DNA.
DR   EMBL; DAAPJU010000005; HAD6475521.1; -; Genomic_DNA.
DR   EMBL; DAAPKC010000005; HAD6498721.1; -; Genomic_DNA.
DR   EMBL; DAAPJY010000005; HAD6531437.1; -; Genomic_DNA.
DR   EMBL; DAAPKB010000005; HAD6536478.1; -; Genomic_DNA.
DR   EMBL; DAAPKJ010000005; HAD6555044.1; -; Genomic_DNA.
DR   EMBL; DAAPLB010000005; HAD6645713.1; -; Genomic_DNA.
DR   EMBL; DAAPLE010000021; HAD6652650.1; -; Genomic_DNA.
DR   EMBL; DAAPLI010000014; HAD6670892.1; -; Genomic_DNA.
DR   EMBL; DAAPLQ010000005; HAD6702145.1; -; Genomic_DNA.
DR   EMBL; DAAPLP010000005; HAD6707053.1; -; Genomic_DNA.
DR   EMBL; DAAPLU010000005; HAD6720914.1; -; Genomic_DNA.
DR   EMBL; DAAPMD010000005; HAD6772430.1; -; Genomic_DNA.
DR   EMBL; DAAPMH010000008; HAD6790199.1; -; Genomic_DNA.
DR   EMBL; DAAPMK010000005; HAD6801015.1; -; Genomic_DNA.
DR   EMBL; DAAPMO010000005; HAD6814981.1; -; Genomic_DNA.
DR   EMBL; DAAPMN010000005; HAD6819776.1; -; Genomic_DNA.
DR   EMBL; DAAPMQ010000005; HAD6833695.1; -; Genomic_DNA.
DR   EMBL; DAAPMX010000005; HAD6848464.1; -; Genomic_DNA.
DR   EMBL; DAAPNC010000005; HAD6886764.1; -; Genomic_DNA.
DR   EMBL; DAAPNQ010000005; HAD6923618.1; -; Genomic_DNA.
DR   EMBL; DAAPOO010000005; HAD6928428.1; -; Genomic_DNA.
DR   EMBL; DAAPOY010000005; HAD6947854.1; -; Genomic_DNA.
DR   EMBL; DAAPOS010000005; HAD6995903.1; -; Genomic_DNA.
DR   EMBL; DAAPNK010000014; HAD7006449.1; -; Genomic_DNA.
DR   EMBL; DAAPNY010000005; HAD7015210.1; -; Genomic_DNA.
DR   EMBL; DAAPNL010000006; HAD7020266.1; -; Genomic_DNA.
DR   EMBL; DAAPNV010000005; HAD7024715.1; -; Genomic_DNA.
DR   EMBL; DAAPOD010000005; HAD7065065.1; -; Genomic_DNA.
DR   EMBL; DAAPNZ010000005; HAD7069571.1; -; Genomic_DNA.
DR   EMBL; DAAPOZ010000015; HAD7105267.1; -; Genomic_DNA.
DR   EMBL; DAAPOK010000005; HAD7118510.1; -; Genomic_DNA.
DR   EMBL; DAAPPD010000005; HAD7137684.1; -; Genomic_DNA.
DR   EMBL; DAAPPE010000005; HAD7142653.1; -; Genomic_DNA.
DR   EMBL; DAAPPG010000021; HAD7153872.1; -; Genomic_DNA.
DR   EMBL; DAAPPH010000005; HAD7156503.1; -; Genomic_DNA.
DR   EMBL; DAAPPQ010000005; HAD7175207.1; -; Genomic_DNA.
DR   EMBL; DAAPPU010000005; HAD7197934.1; -; Genomic_DNA.
DR   RefSeq; WP_000795487.1; NZ_QASL01000003.1.
DR   AlphaFoldDB; A0A0H3NCT9; -.
DR   SMR; A0A0H3NCT9; -.
DR   KEGG; sey:SL1344_1892; -.
DR   PATRIC; fig|216597.6.peg.2103; -.
DR   HOGENOM; CLU_024572_2_0_6; -.
DR   OMA; FFHWYYP; -.
DR   BioCyc; SENT216597:SL1344_RS09820-MONOMER; -.
DR   Proteomes; UP000008962; Chromosome.
DR   GO; GO:0004556; F:alpha-amylase activity; IEA:UniProtKB-EC.
DR   GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR   GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR   CDD; cd11318; AmyAc_bac_fung_AmyA; 1.
DR   Gene3D; 2.40.30.140; -; 1.
DR   Gene3D; 3.20.20.80; Glycosidases; 1.
DR   Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR   InterPro; IPR013776; A-amylase_thermo.
DR   InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR   InterPro; IPR013780; Glyco_hydro_b.
DR   InterPro; IPR017853; Glycoside_hydrolase_SF.
DR   PANTHER; PTHR43447; ALPHA-AMYLASE; 1.
DR   PANTHER; PTHR43447:SF7; ALPHA-AMYLASE 2-RELATED; 1.
DR   Pfam; PF00128; Alpha-amylase; 1.
DR   PIRSF; PIRSF001021; Alph-amls_thrmst; 1.
DR   SMART; SM00642; Aamy; 1.
DR   SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR   SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE   3: Inferred from homology;
KW   Calcium {ECO:0000256|PIRSR:PIRSR001021-2};
KW   Glycosidase {ECO:0000313|EMBL:HAD6469916.1};
KW   Hydrolase {ECO:0000313|EMBL:HAD6469916.1};
KW   Metal-binding {ECO:0000256|PIRSR:PIRSR001021-2}.
FT   DOMAIN          4..402
FT                   /note="Glycosyl hydrolase family 13 catalytic"
FT                   /evidence="ECO:0000259|SMART:SM00642"
FT   ACT_SITE        235
FT                   /note="Nucleophile"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR001021-1"
FT   ACT_SITE        265
FT                   /note="Proton donor"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR001021-1"
FT   BINDING         104
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR001021-2"
FT   BINDING         198
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR001021-2"
FT   BINDING         206
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR001021-2"
FT   BINDING         239
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR001021-2"
SQ   SEQUENCE   494 AA;  56522 MW;  5C1E862FEDD5E47C CRC64;
     MKNPTLLQYF HWYYPDGGKL WSELAERADG LNDIGINMVW LPPACKGASG GYSVGYDTYD
     LFDLGEFDQK GTIATKYGDK RQLLTAIDAL KKNNIAVLLD VVVNHKMGAD EKERIRVQRV
     NQDDRTQIDD NIIECEGWTR YTFPARAGQY SNFIWDYHCF SGIDHIENPD EDGIFKIVND
     YTGDGWNDQV DDEMGNFDYL MGENIDFRNH AVTEEIKYWA RWVMEQTHCD GFRLDAVKHI
     PAWFYKEWIE HVQAVAPKPL FIVAEYWSHE VDKLQTYIDQ VDGKTMLFDA PLQMKFHEAS
     RQGAEYDMRH IFTGTLVEAD PFHAVTLVAN HDTQPLQALE APVEPWFKPL AYALILLREN
     GVPSVFYPDL YGASYEDSGE NGETCRVDMP VINQLDRLIL ARQRFAHGIQ TLFFDHPNCI
     AFSRSGTEEN PGCVVVLSNG DDGEKTLLLG DNYANKTWRD FLGNRDEYVV TNDQGEATFF
     CNAGSVSVWV IEDV
//
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